RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SLC17A8Q8NDX2 589 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 C1orf162Q8NEQ5 155 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-205ENST00000433888 SNX19Q92543 992 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 HDAC10Q969S8 669 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 VKORC1Q9BQB6 163 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 KLC4Q9NSK0 619 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 PCDHB1Q9Y5F3 818 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 WNT6Q9Y6F9 365 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 ADGRA2Q96PE1 1338 aa5.12□□□□□ -1.59
PTPN4-205ENST00000433888 PCDHGA12O60330 932 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 RAB39AQ14964 217 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 C3orf36Q3SXR2 165 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 MIGA2Q7L4E1 593 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 AMIGO2Q86SJ2 522 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 CNTD1Q8N815 330 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 C9orf106Q8NAJ2 232 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 RFKQ969G6 155 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 HAPLN3Q96S86 360 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 PACSIN1Q9BY11 444 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 IMPG2Q9BZV3 1241 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 FLRT1Q9NZU1 646 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 CALCOCO1Q9P1Z2 691 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-205ENST00000433888 SAP30BPQ9UHR5 308 aaKnown RBP5.11□□□□□ -1.59
PTPN4-205ENST00000433888 ST3GAL5Q9UNP4 418 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-205ENST00000433888 PCDHGA9Q9Y5G4 932 aaKnown RBP5.11□□□□□ -1.59
PTPN4-205ENST00000433888 PCDHGA8Q9Y5G5 932 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 PCDHGA7Q9Y5G6 932 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 PCDHGA6Q9Y5G7 932 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 PCDHGA3Q9Y5H0 932 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 SPATA31A3Q5VYP0 1347 aa5.11□□□□□ -1.59
PTPN4-205ENST00000433888 TOR1BO14657 336 aa5.1□□□□□ -1.59
PTPN4-205ENST00000433888 CD1AP06126 327 aa5.1□□□□□ -1.59
PTPN4-205ENST00000433888 NPTX2P47972 431 aa5.1□□□□□ -1.59
PTPN4-205ENST00000433888 ITIH3Q06033 890 aa5.1□□□□□ -1.59
PTPN4-205ENST00000433888 PIGFQ07326 219 aa5.1□□□□□ -1.59
PTPN4-205ENST00000433888 BHLHA9Q7RTU4 235 aa5.1□□□□□ -1.59
PTPN4-205ENST00000433888 RASAL3Q86YV0 1011 aa5.1□□□□□ -1.59
PTPN4-205ENST00000433888 SEMA6DQ8NFY4 1073 aa5.1□□□□□ -1.59
PTPN4-205ENST00000433888 FBXO41Q8TF61 875 aa5.1□□□□□ -1.59
PTPN4-205ENST00000433888 TMA7Q9Y2S6 64 aaKnown RBP5.1□□□□□ -1.59
PTPN4-205ENST00000433888 GCOM1H8Y6P7 765 aaPredicted RBP5.09□□□□□ -1.59
PTPN4-205ENST00000433888 LATS1O95835 1130 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 ANXA1P04083 346 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 CNGA1P29973 690 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 IARSP41252 1262 aaKnown RBP5.09□□□□□ -1.59
PTPN4-205ENST00000433888 EXOSC10Q01780 885 aaKnown RBP5.09□□□□□ -1.59
PTPN4-205ENST00000433888 CLUL1Q15846 466 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 TAPT1Q6NXT6 567 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 PGM2L1Q6PCE3 622 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 FAM9AQ8IZU1 332 aaPredicted RBP5.09□□□□□ -1.59
PTPN4-205ENST00000433888 ATL2Q8NHH9 583 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 COA7Q96BR5 231 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 FAXDC2Q96IV6 333 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 CLPTM1LQ96KA5 538 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 PBKQ96KB5 322 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 TRIB1Q96RU8 372 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 AMBRA1Q9C0C7 1298 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 PUS7LQ9H0K6 701 aaKnown RBP5.09□□□□□ -1.59
PTPN4-205ENST00000433888 ETAA1Q9NY74 926 aa5.09□□□□□ -1.59
PTPN4-205ENST00000433888 CCDC154A6NI56 674 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 PRSS29PA6NIE9 313 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 NT5C1B-RDH14C9J2C7 533 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 PROB1E7EW31 1015 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 F2RL2O00254 374 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 DSC2Q02487 901 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 PREPLQ4J6C6 727 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-205ENST00000433888 ZNF782Q6ZMW2 699 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-205ENST00000433888 DDX42Q86XP3 938 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTPN4-205ENST00000433888 PDSS2Q86YH6 399 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 B3GALNT2Q8NCR0 500 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 KAT5Q92993 513 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 OSBPL9Q96SU4 736 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 SLC5A4Q9NY91 659 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 SERGEFQ9UGK8 458 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 CACNA1IQ9P0X4 2223 aa5.08□□□□□ -1.6
PTPN4-205ENST00000433888 ZNF804BA4D1E1 1349 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 A0A0B4J269 797 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 LINC01548A6NM66 108 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 FZD9O00144 591 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 RHOP08100 348 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 PCSK6P29122 969 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 SLC16A1P53985 500 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 EIF2B5Q13144 721 aaKnown RBP5.07□□□□□ -1.6
PTPN4-205ENST00000433888 SNAPC2Q13487 334 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 TUBB3Q13509 450 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 LLGL1Q15334 1064 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 C11orf87Q6NUJ2 197 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 NSUN6Q8TEA1 469 aaKnown RBP5.07□□□□□ -1.6
PTPN4-205ENST00000433888 SCAMP4Q969E2 229 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 SMOQ99835 787 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 SERTAD4Q9NUC0 356 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 MRPS18AQ9NVS2 196 aaKnown RBP5.07□□□□□ -1.6
PTPN4-205ENST00000433888 SIDT1Q9NXL6 827 aaKnown RBP5.07□□□□□ -1.6
PTPN4-205ENST00000433888 PRKAB1Q9Y478 270 aa5.07□□□□□ -1.6
PTPN4-205ENST00000433888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTPN4-205ENST00000433888 F5H697 171 aa5.06□□□□□ -1.6
PTPN4-205ENST00000433888 URI1O94763 535 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-205ENST00000433888 TTLL1O95922 423 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms