RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PGS1Q32NB8 556 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 IFIT1BQ5T764 474 aaKnown RBP2.74□□□□□ -1.97
CDC40-204ENST00000431461 GADL1Q6ZQY3 521 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 USP45Q70EL2 814 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 PTF1AQ7RTS3 328 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 RSPH3Q86UC2 560 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 MAGEB6Q8N7X4 407 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 SLC35B2Q8TB61 432 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 COA7Q96BR5 231 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 TIMP4Q99727 224 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 RHOBTB2Q9BYZ6 727 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 MS4A5Q9H3V2 200 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 WDCPQ9H6R7 721 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 GALNT9Q9HCQ5 603 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 CASS4Q9NQ75 786 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 RLIMQ9NVW2 624 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 SIDT1Q9NXL6 827 aaKnown RBP2.74□□□□□ -1.97
CDC40-204ENST00000431461 CHPF2Q9P2E5 772 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 KLHL42Q9P2K6 505 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 PCDHGA2Q9Y5H1 932 aa2.74□□□□□ -1.97
CDC40-204ENST00000431461 A0A1B0GTW7 788 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 LCHNA4D1U4 455 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 WIPF3A6NGB9 483 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 CXorf49A8MYA2 514 aaPredicted RBP2.73□□□□□ -1.97
CDC40-204ENST00000431461 H3BML4 177 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 FOXN3O00409 490 aaPredicted RBP2.73□□□□□ -1.97
CDC40-204ENST00000431461 ADCY6O43306 1168 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 PLIN1O60240 522 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 CAND2O75155 1236 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 GPR32O75388 356 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 SCGB1D2O95969 90 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 BMP15O95972 392 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 CELA2AP08217 269 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 POU2F2P09086 479 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 MTHFD1P11586 935 aaKnown RBP2.73□□□□□ -1.97
CDC40-204ENST00000431461 WT1P19544 449 aaPredicted RBP2.73□□□□□ -1.97
CDC40-204ENST00000431461 CACNB3P54284 484 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 CXADRP78310 365 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 GPSM2P81274 684 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 MLC1Q15049 377 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 CYP2A13Q16696 494 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 ATAT1Q5SQI0 421 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 PRAMEF14Q5SWL7 426 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 RUSC1-AS1Q66K80 236 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 OTUD7BQ6GQQ9 843 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 MED25Q71SY5 747 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 ZNF572Q7Z3I7 529 aaPredicted RBP2.73□□□□□ -1.97
CDC40-204ENST00000431461 FMNL3Q8IVF7 1028 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 PQLC1Q8N2U9 271 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 LNX2Q8N448 690 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 PRR18Q8N4B5 295 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 C3orf20Q8ND61 904 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 ACTRT2Q8TDY3 377 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 HOXB13Q92826 284 aaPredicted RBP2.73□□□□□ -1.97
CDC40-204ENST00000431461 DDX17Q92841 729 aaKnown RBP2.73□□□□□ -1.97
CDC40-204ENST00000431461 NACC2Q96BF6 587 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 MVB12AQ96EY5 273 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 CDK5RAP3Q96JB5 506 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 UROC1Q96N76 676 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 HEPHQ9BQS7 1158 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 AIFM2Q9BRQ8 373 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 CNNM1Q9NRU3 951 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 FEZ2Q9UHY8 353 aaPredicted RBP2.73□□□□□ -1.97
CDC40-204ENST00000431461 INTUQ9ULD6 942 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 G3BP2Q9UN86 482 aaKnown RBP2.73□□□□□ -1.97
CDC40-204ENST00000431461 DMTF1Q9Y222 760 aa2.73□□□□□ -1.97
CDC40-204ENST00000431461 TP73O15350 636 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 HTRA2O43464 458 aaPredicted RBP2.72□□□□□ -1.97
CDC40-204ENST00000431461 PRC1O43663 620 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PCDHGA12O60330 932 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 HRGP04196 525 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 IGKV2-30P06310 120 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 GNAI3P08754 354 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 KRT10P13645 584 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 ATF3P18847 181 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PDCP20941 246 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 GCSHP23434 173 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 SMARCA1P28370 1054 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 GUCY1A2P33402 732 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PTGER1P34995 402 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PTPN7P35236 360 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 SREBF1P36956 1147 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 FXR1P51114 621 aaKnown RBP eCLIP2.72□□□□□ -1.97
CDC40-204ENST00000431461 CTXN1P60606 82 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 GNAI1P63096 354 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 FHL1Q13642 323 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 UBXN2BQ14CS0 331 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 CCDC157Q569K6 752 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 DACT2Q5SW24 774 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 KIAA0895LQ68EN5 471 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 PPP4R4Q6NUP7 873 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 ZNF517Q6ZMY9 492 aaPredicted RBP2.72□□□□□ -1.97
CDC40-204ENST00000431461 SEM1Q6ZVN7 128 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 CATIPQ7Z7H3 387 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 DENND1CQ8IV53 801 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 CMIPQ8IY22 773 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 CAMKK1Q8N5S9 505 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 NSUN6Q8TEA1 469 aaKnown RBP2.72□□□□□ -1.97
CDC40-204ENST00000431461 NRG4Q8WWG1 115 aa2.72□□□□□ -1.97
CDC40-204ENST00000431461 HPS3Q969F9 1004 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms