RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 OR8K1Q8NGG5 319 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 AUTS2Q8WXX7 1259 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 JAKMIP2Q96AA8 810 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 CASD1Q96PB1 797 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 DNAJC7Q99615 494 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 ASB7Q9H672 318 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 NHEJ1Q9H9Q4 299 aaPredicted RBP10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 CEP72Q9P209 647 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 PCDHB7Q9Y5E2 793 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 PCDHB4Q9Y5E5 795 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 PCDHGC5Q9Y5F6 944 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 ITIH6Q6UXX5 1313 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 VPS13AQ96RL7 3174 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 PODXLO00592 558 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 C2CD2LO14523 706 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 KIAA0355O15063 1070 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 IL18RAPO95256 599 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 GJB6O95452 261 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 ZBED6P86452 979 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 IKBKEQ14164 716 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 WDR44Q5JSH3 913 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 KIAA0319Q5VV43 1072 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 WSCD1Q658N2 575 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 MRPL10Q7Z7H8 261 aaKnown RBP10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 CEP57Q86XR8 500 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 GOLPH3Q9H4A6 298 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 LRFN2Q9ULH4 789 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 L1RE1Q9UN81 338 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 COL4A6Q14031 1691 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 VWA8A3KMH1 1905 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 DOCK6Q96HP0 2047 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 TULP2O00295 520 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 RPL17P18621 184 aaKnown RBP10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 ABCD1P33897 745 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 UPP1Q16831 310 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 NOMO2Q5JPE7 1267 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 SFMBT2Q5VUG0 894 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 GLB1LQ6UWU2 654 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 ACOT1Q86TX2 421 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 OSTM1Q86WC4 334 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 FEZF2Q8TBJ5 459 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 WHAMMQ8TF30 809 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 PCDHB18PQ96TA0 734 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 GPR62Q9BZJ7 368 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 ELOVL4Q9GZR5 314 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 NRDE2Q9H7Z3 1164 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 LZTFL1Q9NQ48 299 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 BRWD1Q9NSI6 2320 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 PRKAG2Q9UGJ0 569 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 C2CD2Q9Y426 696 aa10.19□□□□□ -0.78
HMGCLL1-206ENST00000428842 KPNA7A9QM74 516 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 CLDN5O00501 218 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 PIRO00625 290 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 ZNF623O75123 536 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 KCNE1P15382 129 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 NDST1P52848 882 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 KLHL30Q0D2K2 578 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 XKR4Q5GH76 650 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 ZNF667Q5HYK9 610 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 ABI1Q8IZP0 508 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 USP38Q8NB14 1042 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 LNX1Q8TBB1 728 aaPredicted RBP10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 KBTBD7Q8WVZ9 684 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 GTPBP10A4D1E9 387 aaKnown RBP10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 KIAA0391O15091 583 aaKnown RBP10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 CHRNB2P17787 502 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 CYP3A5P20815 502 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 ABCB4P21439 1286 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 DNAJB2P25686 324 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 SOX5P35711 763 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 KCNJ6P48051 423 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 SLC11A1P49279 550 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 FAM189BP81408 668 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 CETN1Q12798 172 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 SGSM1Q2NKQ1 1148 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 TMEM240Q5SV17 173 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 DAB2IPQ5VWQ8 1189 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 CCAR2Q8N163 923 aaKnown RBP10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 PDCL2Q8N4E4 241 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 RBBP8NLQ8NC74 664 aaPredicted RBP10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 BEST2Q8NFU1 509 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 OR6B3Q8NGW1 331 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 CPA5Q8WXQ8 436 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 STK33Q9BYT3 514 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 LACRTQ9GZZ8 138 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 TMEM30AQ9NV96 361 aa10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 UBQLN1Q9UMX0 589 aaKnown RBP10.18□□□□□ -0.78
HMGCLL1-206ENST00000428842 ANO9A1A5B4 782 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 DDX3XO00571 662 aaKnown RBP eCLIP10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 NRP1O14786 923 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CAND2O75155 1236 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CCDC130P13994 396 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 CD19P15391 556 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 GTF2H1P32780 548 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 PBX2P40425 430 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 RBP5P82980 135 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 FPGSQ05932 587 aa10.17□□□□□ -0.78
HMGCLL1-206ENST00000428842 ASIC2Q16515 512 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms