RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 PARVAQ9NVD7 372 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 SNX24Q9Y343 169 aa14.89□□□□□ -0.03
APOBEC3D-202ENST00000427494 TLR3O15455 904 aaKnown RBP14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 PPFIA4O75335 1185 aa14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 LSM8O95777 96 aaKnown RBP14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 MMP3P08254 477 aa14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 MMP8P22894 467 aa14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 GRIK4Q16099 956 aa14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 SPRYD7Q5W111 196 aa14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 LRIG3Q6UXM1 1119 aa14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 PLEKHH3Q7Z736 793 aa14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 C12orf50Q8NA57 414 aaPredicted RBP14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 DDX27Q96GQ7 796 aaKnown RBP14.88□□□□□ -0.03
APOBEC3D-202ENST00000427494 PODXLO00592 558 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 FSCN2O14926 492 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 PSTPIP1O43586 416 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 ERLIN2O94905 339 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 CALB1P05937 261 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 SSR1P43307 286 aaKnown RBP14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 RAP1GAPP47736 663 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 FNTAP49354 379 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 DHX9Q08211 1270 aaKnown RBP14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 ACVR2BQ13705 512 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 DUSP28Q4G0W2 176 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 SGO2Q562F6 1265 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 ZNF667Q5HYK9 610 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 CEP85LQ5SZL2 805 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 JADE1Q6IE81 842 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 TMEM130Q8N3G9 435 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 C2orf69Q8N8R5 385 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 C1orf127Q8N9H9 656 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 TMEM35BQ8NCS4 154 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 FEZF2Q8TBJ5 459 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 TINF2Q9BSI4 451 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 SIX4Q9UIU6 781 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 USTQ9Y2C2 406 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 PTPN22Q9Y2R2 807 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 CELF2O95319 508 aaKnown RBP14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 ARF4P18085 180 aaPredicted RBP14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 GJC1P36383 396 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 KCNJ1P48048 391 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 DRG2P55039 364 aaKnown RBP14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 FAM110CQ1W6H9 321 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 KCTD16Q68DU8 428 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 LEKR1Q6ZMV7 388 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 CCDC50Q8IVM0 306 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 RHOT1Q8IXI2 618 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 NPLOC4Q8TAT6 608 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 C1orf54Q8WWF1 131 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 TFAP2BQ92481 460 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 PTPN18Q99952 460 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 LRRC19Q9H756 370 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 ZDHHC18Q9NUE0 388 aa14.87□□□□□ -0.03
APOBEC3D-202ENST00000427494 GOLGA6L10A6NI86 522 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 MEFVO15553 781 aaPredicted RBP14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 ITGB3P05106 788 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 MAN1A1P33908 653 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 RPL21P46778 160 aaKnown RBP14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 PLTPP55058 493 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 TAS2R40P59535 323 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 LACTBP83111 547 aaPredicted RBP14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 WDR72Q3MJ13 1102 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 DNAJC24Q6P3W2 148 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 ZDHHC24Q6UX98 284 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 SH2D3CQ8N5H7 860 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 OR2W6PQ8NHA6 318 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 MAIP1Q8WWC4 291 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 ZNF518BQ9C0D4 1074 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 ABHD16BQ9H3Z7 469 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 GRHL1Q9NZI5 618 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 IP6K2Q9UHH9 426 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 PCDHGC3Q9UN70 934 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 CEP83Q9Y592 693 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 KAT6AQ92794 2004 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 PASKQ96RG2 1323 aa14.86□□□□□ -0.03
APOBEC3D-202ENST00000427494 H0YGN5 161 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 O00370 1275 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 PPFIA2O75334 1257 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 ECEL1O95672 775 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 CD19P15391 556 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 GBP1P32455 592 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 ACTN2P35609 894 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 RPL7AP62424 266 aaKnown RBP14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 DGKDQ16760 1214 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 DNAJC21Q5F1R6 531 aaKnown RBP14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 MARCH8Q5T0T0 291 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 BCO2Q9BYV7 579 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 ATP8A1Q9Y2Q0 1164 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 NFS1Q9Y697 457 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 TSPAN1O60635 241 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 HOXD8P13378 290 aaPredicted RBP14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 EIF4BP23588 611 aaKnown RBP14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 CDH8P55286 799 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 SNX1Q13596 522 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 PPP1R7Q15435 360 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 KYAT1Q16773 422 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 IQSEC1Q6DN90 963 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 DENND1BQ6P3S1 775 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms