RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 NLRP7Q8WX94 980 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 FAM213AQ9BRX8 229 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 PAIP2BQ9ULR5 123 aaKnown RBP16.89■□□□□ 0.29
PKP4-205ENST00000426248 PSMC4P43686 418 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 KCNMA1Q12791 1236 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 THNSL1Q8IYQ7 743 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 TRAPPC12Q8WVT3 735 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 NMD3Q96D46 503 aaKnown RBP16.88■□□□□ 0.29
PKP4-205ENST00000426248 MBOAT7Q96N66 472 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 SMC6Q96SB8 1091 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 CENPKQ9BS16 269 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 ANKEF1Q9NU02 776 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■■■■ 30.8
PKP4-205ENST00000426248 PDXKO00764 312 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 USP46P62068 366 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 SPIRE1Q08AE8 756 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 LCA5Q86VQ0 697 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 CDR2LQ86X02 465 aaPredicted RBP16.88■□□□□ 0.29
PKP4-205ENST00000426248 FITM2Q8N6M3 262 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 XXYLT1Q8NBI6 393 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 CEP63Q96MT8 703 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■□□□ 12.4
PKP4-205ENST00000426248 LRRC4CQ9HCJ2 640 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 WRAP73Q9P2S5 460 aaPredicted RBP16.88■□□□□ 0.29
PKP4-205ENST00000426248 CALCOCO2Q13137 446 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 METTL7BQ6UX53 244 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 MAP7D3Q8IWC1 876 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 FAM167AQ96KS9 214 aa16.88■□□□□ 0.29
PKP4-205ENST00000426248 MANSC4A6NHS7 340 aaPredicted RBP16.87■□□□□ 0.29
PKP4-205ENST00000426248 H0YCG3 227 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 GH1P01241 217 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 TMEM62Q0P6H9 643 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 C1orf186Q6ZWK4 172 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 PDCD7Q8N8D1 485 aaKnown RBP16.87■□□□□ 0.29
PKP4-205ENST00000426248 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.87■□□□□ 0.29
PKP4-205ENST00000426248 COQ9O75208 318 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 SNX30Q5VWJ9 437 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 IQCDQ96DY2 449 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 PBKQ96KB5 322 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 C6orf222P0C671 652 aaPredicted RBP16.87■□□□□ 0.29
PKP4-205ENST00000426248 CCNFP41002 786 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 MYL7Q01449 175 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 CCDC105Q8IYK2 499 aa16.87■□□□□ 0.29
PKP4-205ENST00000426248 CSDE1O75534 798 aaKnown RBP16.86■□□□□ 0.29
PKP4-205ENST00000426248 BRAFP15056 766 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 MAPK4P31152 587 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 VHLP40337 213 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 MAGEA8P43361 318 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 MAGEA10P43363 369 aaPredicted RBP16.86■□□□□ 0.29
PKP4-205ENST00000426248 VPS41P49754 854 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 HSDL1Q3SXM5 330 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 WDR44Q5JSH3 913 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
PKP4-205ENST00000426248 SRRM1Q8IYB3 904 aaKnown RBP16.86■□□□□ 0.29
PKP4-205ENST00000426248 APOL6Q9BWW8 343 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 SMARCAD1Q9H4L7 1026 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 RXFP1Q9HBX9 757 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 BLOC1S6Q9UL45 172 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 KCNH4Q9UQ05 1017 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 SPATA31C2B4DYI2 1134 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 TISP43B9A030 160 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 CAPN9O14815 690 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 SLC26A4O43511 780 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 LRRC36Q1X8D7 754 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 ZNF720Q7Z2F6 126 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 GPR142Q7Z601 462 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 RBBP8NLQ8NC74 664 aaPredicted RBP16.86■□□□□ 0.29
PKP4-205ENST00000426248 SCG3Q8WXD2 468 aaKnown RBP16.86■□□□□ 0.29
PKP4-205ENST00000426248 KCND2Q9NZV8 630 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 ECM29Q5VYK3 1845 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 STRNO43815 780 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 ZNF286BP0CG31 522 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 GJA5P36382 358 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 NPTX2P47972 431 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 CYP4F22Q6NT55 531 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 RDM1Q8NG50 284 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 ZNF317Q96PQ6 595 aaPredicted RBP16.86■□□□□ 0.29
PKP4-205ENST00000426248 MSTO1Q9BUK6 570 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 ATXN10Q9UBB4 475 aa16.86■□□□□ 0.29
PKP4-205ENST00000426248 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 TFDP1Q14186 410 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.85■□□□□ 0.292e-7■■■■■ 64.2
PKP4-205ENST00000426248 RMDN2Q96LZ7 410 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 AMFRQ9UKV5 643 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 CCDC188H7C350 402 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 GSTA2P09210 222 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 TGFB3P10600 412 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 TRPC3Q13507 836 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 MAPK6Q16659 721 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 LDLRAD1Q5T700 205 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 PHLDB3Q6NSJ2 640 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 IRGCQ6NXR0 463 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 PIGWQ7Z7B1 504 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 PAF1Q8N7H5 531 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 SEMA4AQ9H3S1 761 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 DMAP1Q9NPF5 467 aaPredicted RBP16.85■□□□□ 0.29
PKP4-205ENST00000426248 NMRK1Q9NWW6 199 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 LRCH1Q9Y2L9 728 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 A0A087X0T9 212 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 FOXO6A8MYZ6 492 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms