RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SLKQ9H2G2 1235 aaPredicted RBP6.98□□□□□ -1.29
SDCBP-203ENST00000424270 DNAAF2Q9NVR5 837 aaKnown RBP6.98□□□□□ -1.29
SDCBP-203ENST00000424270 IL17BQ9UHF5 180 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 NUB1Q9Y5A7 615 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 KALRNO60229 2985 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 PIEZO2Q9H5I5 2752 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 TDRD15B5MCY1 1934 aaKnown RBP6.97□□□□□ -1.29
SDCBP-203ENST00000424270 MYH9P35579 1960 aaKnown RBP6.97□□□□□ -1.29
SDCBP-203ENST00000424270 IGLV3-22A0A075B6J6 115 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 TBX3O15119 743 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 ASAP2O43150 1006 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 ZBTB24O43167 697 aaPredicted RBP6.97□□□□□ -1.29
SDCBP-203ENST00000424270 ABLIM3O94929 683 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 FGF19O95750 216 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 ATXN1LP0C7T5 689 aaKnown RBP6.97□□□□□ -1.29
SDCBP-203ENST00000424270 GNSP15586 552 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 GABRR2P28476 465 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 ADSSP30520 456 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 HNF1BP35680 557 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 AVPR1AP37288 418 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 BRCC3P46736 316 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 RHDQ02161 417 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 NBR1Q14596 966 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 PCBP1Q15365 356 aaKnown RBP eCLIP6.97□□□□□ -1.29
SDCBP-203ENST00000424270 TPGS2Q68CL5 300 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 SYNE3Q6ZMZ3 975 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 FRMD1Q8N878 549 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 GSTCDQ8NEC7 633 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 ENGASEQ8NFI3 743 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 RHBDD1Q8TEB9 315 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 CCDC43Q96MW1 224 aaKnown RBP6.97□□□□□ -1.29
SDCBP-203ENST00000424270 TBC1D32Q96NH3 1257 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 LRRC3BQ96PB8 259 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 FNBP1Q96RU3 617 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 MAP3K14Q99558 947 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 CDC6Q99741 560 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 UNC45AQ9H3U1 944 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 FBRSL1Q9HCM7 1045 aaKnown RBP6.97□□□□□ -1.29
SDCBP-203ENST00000424270 OBP2AQ9NY56 170 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 KIAA1522Q9P206 1035 aaPredicted RBP6.97□□□□□ -1.29
SDCBP-203ENST00000424270 PCOLCE2Q9UKZ9 415 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 YIPF1Q9Y548 306 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 THADAQ6YHU6 1953 aa6.97□□□□□ -1.29
SDCBP-203ENST00000424270 URB1O60287 2271 aaKnown RBP6.96□□□□□ -1.3
SDCBP-203ENST00000424270 HIP1O00291 1037 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 B4GALT5O43286 388 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 PRAMEF12O95522 483 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 GP1BBP13224 206 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 KRT10P13645 584 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 JUPP14923 745 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ARSAP15289 507 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ARF4P18085 180 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-203ENST00000424270 LIG1P18858 919 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 MARCKSP29966 332 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-203ENST00000424270 RFC5P40937 340 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 P2RY2P41231 377 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 CLCNKBP51801 687 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 PDE1AP54750 535 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 NPEPPSP55786 919 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 CYP4F8P98187 520 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ZNF33AQ06730 810 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 GLRA4Q5JXX5 417 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 SPDYCQ5MJ68 293 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 SYCP2LQ5T4T6 812 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ARHGAP40Q5TG30 622 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 PPP4R3AQ6IN85 833 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 SLC8B1Q6J4K2 584 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ZNF280DQ6N043 979 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 FERMT3Q86UX7 667 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 TICAM2Q86XR7 235 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 NAF1Q96HR8 494 aaKnown RBP6.96□□□□□ -1.3
SDCBP-203ENST00000424270 CCDC136Q96JN2 1154 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 PGLYRP2Q96PD5 576 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 LGMNQ99538 433 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 MTRQ99707 1265 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ADPGKQ9BRR6 497 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 POLR3CQ9BUI4 534 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-203ENST00000424270 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ANKMY1Q9P2S6 941 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 SUSD2Q9UGT4 822 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 AFF4Q9UHB7 1163 aaKnown RBP6.96□□□□□ -1.3
SDCBP-203ENST00000424270 FBXL5Q9UKA1 691 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 GDAQ9Y2T3 454 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 SLC12A7Q9Y666 1083 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ACACAQ13085 2346 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 NUP205Q92621 2012 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 NOTCH4Q99466 2003 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ASCC3Q8N3C0 2202 aaKnown RBP6.96□□□□□ -1.3
SDCBP-203ENST00000424270 ASXL3Q9C0F0 2248 aa6.96□□□□□ -1.3
SDCBP-203ENST00000424270 VWA8A3KMH1 1905 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 APC2O95996 2303 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 EML5Q05BV3 1969 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 TCRBV21S2A2A0A5A6 115 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 E9PAM4 449 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 DKC1O60832 514 aaKnown RBP eCLIP6.95□□□□□ -1.3
SDCBP-203ENST00000424270 NDUFS2O75306 463 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 RECQL4O94761 1208 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 CYP3A4P08684 503 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 GJA4P35212 333 aa6.95□□□□□ -1.3
SDCBP-203ENST00000424270 IFNAR2P48551 515 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms