RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 POF1BQ8WVV4 589 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 GAS2L1Q99501 681 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-209ENST00000422933 PAAF1Q9BRP4 392 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 EMILIN2Q9BXX0 1053 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 VRTNQ9H8Y1 702 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 CERS4Q9HA82 394 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 CYP3A43Q9HB55 503 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 ALG13Q9NP73 1137 aaKnown RBP10.7□□□□□ -0.7
HDLBP-209ENST00000422933 TLR9Q9NR96 1032 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 GDAP2Q9NXN4 497 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 COQ4Q9Y3A0 265 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 DAAM1Q9Y4D1 1078 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 SCN1AP35498 2009 aa10.7□□□□□ -0.7
HDLBP-209ENST00000422933 LGALS16A8MUM7 142 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 M0QZQ0 153 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 CXCL14O95715 111 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 ASS1P00966 412 aaKnown RBP10.69□□□□□ -0.7
HDLBP-209ENST00000422933 ITGB1P05556 798 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 TPM1P09493 284 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 ATP1A3P13637 1013 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 RFX1P22670 979 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 PCSK1P29120 753 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 BRCC3P46736 316 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 MFAP3P55082 362 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 TIGD5Q53EQ6 642 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 C1orf220Q5T0J3 134 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 OVOS1Q6IE37 1185 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 ZNF280DQ6N043 979 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 FMNL3Q8IVF7 1028 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 PPM1KQ8N3J5 372 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 NEK11Q8NG66 645 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 ANP32BQ92688 251 aaKnown RBP10.69□□□□□ -0.7
HDLBP-209ENST00000422933 IQCDQ96DY2 449 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 TCF25Q9BQ70 676 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 HERC2P3Q9BVR0 1158 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 TRIM5Q9C035 493 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 NIF3L1Q9GZT8 377 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 INTS2Q9H0H0 1204 aaKnown RBP10.69□□□□□ -0.7
HDLBP-209ENST00000422933 HCSTQ9UBK5 93 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 DPP7Q9UHL4 492 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 SIX4Q9UIU6 781 aa10.69□□□□□ -0.7
HDLBP-209ENST00000422933 RBAK-RBAKDNI3L0D1 243 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 C2CD2LO14523 706 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 VNN1O95497 513 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 SRGAP2BP0DMP2 458 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 CTSAP10619 480 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 GNL1P36915 607 aaPredicted RBP10.68□□□□□ -0.7
HDLBP-209ENST00000422933 AARSP49588 968 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDLBP-209ENST00000422933 TSPY1Q01534 308 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 LRMPQ12912 555 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 CTXN3Q4LDR2 81 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 MIIPQ5JXC2 388 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 SMYD5Q6GMV2 418 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 CACNA2D4Q7Z3S7 1137 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 PPFIBP1Q86W92 1011 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 DCP1BQ8IZD4 617 aaKnown RBP10.68□□□□□ -0.7
HDLBP-209ENST00000422933 ADGRF2Q8IZF7 708 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 OR6B3Q8NGW1 331 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 SPPL3Q8TCT6 385 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 MYLIPQ8WY64 445 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 RIN2Q8WYP3 895 aaPredicted RBP10.68□□□□□ -0.7
HDLBP-209ENST00000422933 JAKMIP2Q96AA8 810 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 TNIP3Q96KP6 325 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 CRACR2AQ9BSW2 395 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 NUP58Q9BVL2 599 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 GPR62Q9BZJ7 368 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 RTN4Q9NQC3 1192 aaKnown RBP10.68□□□□□ -0.7
HDLBP-209ENST00000422933 MARCH5Q9NX47 278 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 LMCD1Q9NZU5 365 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 CACNG4Q9UBN1 327 aa10.68□□□□□ -0.7
HDLBP-209ENST00000422933 A0A1B0GTH6 734 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-209ENST00000422933 GOLGA6L3A6NEY3 463 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 OR6C75A6NL08 312 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 A8MXQ7 604 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 GOLGA6L6A8MZA4 724 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 I3L4J1 428 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 PPEF2O14830 753 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 B4GALT3O60512 393 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 TACC1O75410 805 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 CYP11A1P05108 521 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 ADH1AP07327 375 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 CCDC172P0C7W6 258 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 FGFR3P22607 806 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 TKTP29401 623 aaKnown RBP10.67□□□□□ -0.7
HDLBP-209ENST00000422933 DSG1Q02413 1049 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 GCNT1Q02742 428 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 SMARCB1Q12824 385 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 CUL2Q13617 745 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 MAPRE1Q15691 268 aaKnown RBP10.67□□□□□ -0.7
HDLBP-209ENST00000422933 PSMD5Q16401 504 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 VARS2Q5ST30 1063 aaKnown RBP10.67□□□□□ -0.7
HDLBP-209ENST00000422933 PLPP4Q5VZY2 271 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 TRIM65Q6PJ69 517 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 SCARA5Q6ZMJ2 495 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 UNC93AQ86WB7 457 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 C3orf58Q8NDZ4 430 aa10.67□□□□□ -0.7
HDLBP-209ENST00000422933 ZNF397Q8NF99 534 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-209ENST00000422933 MAFAQ8NHW3 353 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms