RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 COL12A1Q99715 3063 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 ERVH48-1M5A8F1 160 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 B4GALT5O43286 388 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 CBFA2T3O75081 653 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 ALDH1A2O94788 518 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 PRAMEF12O95522 483 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 GNA11P29992 359 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 GALK1P51570 392 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 ARPP19P56211 112 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 BYSLQ13895 437 aaKnown RBP9.93□□□□□ -0.82
TRIM39-206ENST00000420746 Q4G0T1 1027 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 GPR158Q5T848 1215 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 ANO7Q6IWH7 933 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 ZNF280DQ6N043 979 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 GAREM2Q75VX8 874 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 SLCO6A1Q86UG4 719 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 MICU3Q86XE3 530 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 ZNF579Q8NAF0 562 aaKnown RBP9.93□□□□□ -0.82
TRIM39-206ENST00000420746 C3orf58Q8NDZ4 430 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 TBC1D32Q96NH3 1257 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 CAMK1GQ96NX5 476 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 DCBLD2Q96PD2 775 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 PPP1R10Q96QC0 940 aaKnown RBP9.93□□□□□ -0.82
TRIM39-206ENST00000420746 DNAJC25Q9H1X3 360 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 TASP1Q9H6P5 420 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 FBRSL1Q9HCM7 1045 aaKnown RBP9.93□□□□□ -0.82
TRIM39-206ENST00000420746 C6orf50Q9HD87 102 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 GKN1Q9NS71 199 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 RCAN3Q9UKA8 241 aa9.93□□□□□ -0.82
TRIM39-206ENST00000420746 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 OTOL1A6NHN0 477 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 TBX3O15119 743 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 AP5Z1O43299 807 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 EDIL3O43854 480 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 P4HBP07237 508 aaKnown RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 ITPKAP23677 461 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 IGFBP6P24592 240 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 EIF2S3P41091 472 aaKnown RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 BRCC3P46736 316 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 EPHB3P54753 998 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 CYP4A11Q02928 519 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 CAPSQ13938 189 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 PFKFB3Q16875 520 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 CTXN3Q4LDR2 81 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 PCSK4Q6UW60 755 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 LRRC69Q6ZNQ3 347 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 OTUD6AQ7L8S5 288 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 GPR155Q7Z3F1 870 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 CDR2LQ86X02 465 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 PLEKHM2Q8IWE5 1019 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 C4orf19Q8IY42 314 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 BICD2Q8TD16 824 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 WHAMMQ8TF30 809 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 EZH1Q92800 747 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 CD101Q93033 1021 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 POLR3CQ9BUI4 534 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 OXCT2Q9BYC2 517 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 ATXN3LQ9H3M9 355 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 EBF3Q9H4W6 596 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 KIF9Q9HAQ2 790 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 PRMT7Q9NVM4 692 aaPredicted RBP9.92□□□□□ -0.82
TRIM39-206ENST00000420746 MMP17Q9ULZ9 603 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 COL6A6A6NMZ7 2263 aa9.92□□□□□ -0.82
TRIM39-206ENST00000420746 ATXN2Q99700 1313 aaKnown RBP9.91□□□□□ -0.82
TRIM39-206ENST00000420746 CYP3A7-CYP3A51PA0A087WV96 503 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 FAM205CA6NFA0 338 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 B8ZZF3 427 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 I3L4J1 428 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 N4BP3O15049 544 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 MARCH6O60337 910 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 CYP3A7P24462 503 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 ITPKBP27987 946 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 YWHABP31946 246 aaKnown RBP9.91□□□□□ -0.82
TRIM39-206ENST00000420746 GJA4P35212 333 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 PTH1RQ03431 593 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 NBR1Q14596 966 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 PDGFRLQ15198 375 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 CRY1Q16526 586 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 FAM187BQ17R55 369 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 SYNE3Q6ZMZ3 975 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 ARMCX6Q7L4S7 300 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 RAB11FIP4Q86YS3 637 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 FAM181AQ8N9Y4 354 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 ETNPPLQ8TBG4 499 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 USP33Q8TEY7 942 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 PSMG2Q969U7 264 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 FSCN3Q9NQT6 498 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 XPNPEP1Q9NQW7 623 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 PCOLCE2Q9UKZ9 415 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 STK24Q9Y6E0 443 aa9.91□□□□□ -0.82
TRIM39-206ENST00000420746 MGAQ8IWI9 3026 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 PTPRBP23467 1997 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 MYO9AB2RTY4 2548 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 UBR5O95071 2799 aaPredicted RBP9.9□□□□□ -0.82
TRIM39-206ENST00000420746 A0A1W2PQD8 194 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 ADAMTS3O15072 1205 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 RRP8O43159 456 aaKnown RBP9.9□□□□□ -0.82
TRIM39-206ENST00000420746 CPB1P15086 417 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 GABRR2P28476 465 aa9.9□□□□□ -0.82
TRIM39-206ENST00000420746 CDC25CP30307 473 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms