RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 ZNF445P59923 1031 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 MCCD1P59942 119 aaPredicted RBP19.03■□□□□ 0.64
SBDS-202ENST00000414306 TNNC1P63316 161 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 DSG1Q02413 1049 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 KRT31Q15323 416 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 MAN2A1Q16706 1144 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 KIAA0319Q5VV43 1072 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 WSCD1Q658N2 575 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 FBXL13Q8NEE6 735 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 VPS16Q9H269 839 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 CHST7Q9NS84 486 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 RAB20Q9NX57 234 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 L1RE1Q9UN81 338 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 PLXNA3P51805 1871 aa19.03■□□□□ 0.64
SBDS-202ENST00000414306 C2orf71A6NGG8 1288 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 HUS1O60921 280 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 RAP1GAPP47736 663 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 CDR1P51861 262 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 NOP14P78316 857 aaKnown RBP19.02■□□□□ 0.64
SBDS-202ENST00000414306 LRMPQ12912 555 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 BMS1Q14692 1282 aaKnown RBP19.02■□□□□ 0.64
SBDS-202ENST00000414306 PSMD5Q16401 504 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 ZNF667Q5HYK9 610 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 MIIPQ5JXC2 388 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 FAM200AQ8TCP9 573 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 CRACR2AQ9BSW2 395 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 IMPG2Q9BZV3 1241 aa19.02■□□□□ 0.64
SBDS-202ENST00000414306 APOBEC3GQ9HC16 384 aaKnown RBP19.02■□□□□ 0.64
SBDS-202ENST00000414306 NGRNQ9NPE2 291 aaKnown RBP19.02■□□□□ 0.64
SBDS-202ENST00000414306 SYN3O14994 580 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 N4BP1O75113 896 aaKnown RBP19.01■□□□□ 0.63
SBDS-202ENST00000414306 ASS1P00966 412 aaKnown RBP19.01■□□□□ 0.63
SBDS-202ENST00000414306 ZNF18P17022 549 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 ATICP31939 592 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 GTF2F1P35269 517 aaKnown RBP eCLIP19.01■□□□□ 0.63
SBDS-202ENST00000414306 YWHAHQ04917 246 aaPredicted RBP19.01■□□□□ 0.63
SBDS-202ENST00000414306 CCDC85BQ15834 202 aaPredicted RBP19.01■□□□□ 0.63
SBDS-202ENST00000414306 SGSM1Q2NKQ1 1148 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 VWA3BQ502W6 1294 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 TCEAL5Q5H9L2 206 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 PDCL2Q8N4E4 241 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 MRPL43Q8N983 215 aaKnown RBP19.01■□□□□ 0.63
SBDS-202ENST00000414306 APPL2Q8NEU8 664 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 LNX1Q8TBB1 728 aaPredicted RBP19.01■□□□□ 0.63
SBDS-202ENST00000414306 PPM1EQ8WY54 764 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 IGFLR1Q9H665 355 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 SMYD3Q9H7B4 428 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 STK39Q9UEW8 545 aa19.01■□□□□ 0.63
SBDS-202ENST00000414306 GOLGA6L19H0YKK7 550 aa19■□□□□ 0.63
SBDS-202ENST00000414306 ADAM12O43184 909 aa19■□□□□ 0.63
SBDS-202ENST00000414306 HCRTO43612 131 aa19■□□□□ 0.63
SBDS-202ENST00000414306 CNPP09543 421 aaKnown RBP19■□□□□ 0.63
SBDS-202ENST00000414306 NRIP1P48552 1158 aa19■□□□□ 0.63
SBDS-202ENST00000414306 ARPP19P56211 112 aa19■□□□□ 0.63
SBDS-202ENST00000414306 SOWAHAQ2M3V2 549 aa19■□□□□ 0.63
SBDS-202ENST00000414306 OVOS1Q6IE37 1185 aa19■□□□□ 0.63
SBDS-202ENST00000414306 RSPO2Q6UXX9 243 aaPredicted RBP19■□□□□ 0.63
SBDS-202ENST00000414306 ADGRF2Q8IZF7 708 aa19■□□□□ 0.63
SBDS-202ENST00000414306 CCDC150Q8NCX0 1101 aa19■□□□□ 0.63
SBDS-202ENST00000414306 PIK3R5Q8WYR1 880 aa19■□□□□ 0.63
SBDS-202ENST00000414306 NDST4Q9H3R1 872 aa19■□□□□ 0.63
SBDS-202ENST00000414306 NSUN3Q9H649 340 aaKnown RBP19■□□□□ 0.63
SBDS-202ENST00000414306 GDAP2Q9NXN4 497 aa19■□□□□ 0.63
SBDS-202ENST00000414306 CAVIN2O95810 425 aa19■□□□□ 0.63
SBDS-202ENST00000414306 CDH8P55286 799 aa19■□□□□ 0.63
SBDS-202ENST00000414306 CETN1Q12798 172 aa19■□□□□ 0.63
SBDS-202ENST00000414306 CTXN3Q4LDR2 81 aa19■□□□□ 0.63
SBDS-202ENST00000414306 ANKS3Q6ZW76 656 aa19■□□□□ 0.63
SBDS-202ENST00000414306 METTL23Q86XA0 190 aa19■□□□□ 0.63
SBDS-202ENST00000414306 ANKRD20A12PQ8NF67 263 aa19■□□□□ 0.63
SBDS-202ENST00000414306 TATDN2Q93075 761 aa19■□□□□ 0.63
SBDS-202ENST00000414306 MRPL45Q9BRJ2 306 aaKnown RBP19■□□□□ 0.63
SBDS-202ENST00000414306 TLE6Q9H808 572 aa19■□□□□ 0.63
SBDS-202ENST00000414306 GCNT4Q9P109 453 aa19■□□□□ 0.63
SBDS-202ENST00000414306 CDY1Q9Y6F8 540 aa19■□□□□ 0.63
SBDS-202ENST00000414306 TEX28O15482 410 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 LILRB3O75022 631 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 STAU1O95793 577 aaKnown RBP18.99■□□□□ 0.63
SBDS-202ENST00000414306 OR4Q2P0C623 313 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 TYMPP19971 482 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 ACAT1P24752 427 aaKnown RBP18.99■□□□□ 0.63
SBDS-202ENST00000414306 COPB1P53618 953 aaKnown RBP18.99■□□□□ 0.63
SBDS-202ENST00000414306 RBM10P98175 930 aaKnown RBP18.99■□□□□ 0.63
SBDS-202ENST00000414306 APBA1Q02410 837 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 WDR44Q5JSH3 913 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 PDE12Q6L8Q7 609 aaKnown RBP18.99■□□□□ 0.63
SBDS-202ENST00000414306 ZNF280DQ6N043 979 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 LLGL2Q6P1M3 1020 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 OSTM1Q86WC4 334 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 PALB2Q86YC2 1186 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 TOP6BLQ8N6T0 577 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 KLHL5Q96PQ7 755 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 TMEM209Q96SK2 561 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 INTS2Q9H0H0 1204 aaKnown RBP18.99■□□□□ 0.63
SBDS-202ENST00000414306 SDCBP2Q9H190 292 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 LIMA1Q9UHB6 759 aaKnown RBP18.99■□□□□ 0.63
SBDS-202ENST00000414306 DSEQ9UL01 958 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 COQ4Q9Y3A0 265 aa18.99■□□□□ 0.63
SBDS-202ENST00000414306 ARHGEF37A1IGU5 675 aa18.98■□□□□ 0.63
SBDS-202ENST00000414306 TPM2P07951 284 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms