RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 IQCF3P0C7M6 154 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 ACTN1P12814 892 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 TFE3P19532 575 aaPredicted RBP5.96□□□□□ -1.46
LINC00342-201ENST00000412393 GNA15P30679 374 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 HSPA4P34932 840 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 RFC2P35250 354 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 CYP4F8P98187 520 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 NEDD9Q14511 834 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 NOLC1Q14978 699 aaKnown RBP eCLIP5.96□□□□□ -1.46
LINC00342-201ENST00000412393 RAB30Q15771 203 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 UBE2SQ16763 222 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 HSF5Q4G112 596 aaPredicted RBP5.96□□□□□ -1.46
LINC00342-201ENST00000412393 CPZQ66K79 652 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 CAVIN1Q6NZI2 390 aaKnown RBP5.96□□□□□ -1.46
LINC00342-201ENST00000412393 XRRA1Q6P2D8 792 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 ZC3H14Q6PJT7 736 aaKnown RBP5.96□□□□□ -1.46
LINC00342-201ENST00000412393 BLOC1S2Q6QNY1 142 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 LIPIQ6XZB0 460 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 HEATR3Q7Z4Q2 680 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 CAGE1Q8TC20 777 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 AFAP1L1Q8TED9 768 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 TIFAQ96CG3 184 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 JAKMIP1Q96N16 626 aaKnown RBP5.96□□□□□ -1.46
LINC00342-201ENST00000412393 ASB16Q96NS5 453 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 C16orf70Q9BSU1 422 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 FTOQ9C0B1 505 aaKnown RBP eCLIP5.96□□□□□ -1.46
LINC00342-201ENST00000412393 BCAS3Q9H6U6 928 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 MSRAQ9UJ68 235 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 ACSL6Q9UKU0 697 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 KIF3AQ9Y496 699 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 CORINQ9Y5Q5 1042 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 SNX14Q9Y5W7 946 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 SLC4A7Q9Y6M7 1214 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 LAMA2P24043 3122 aaKnown RBP5.96□□□□□ -1.46
LINC00342-201ENST00000412393 SH3D21A4FU49 640 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 OVOL3O00110 214 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 PRPF40AO75400 957 aaKnown RBP5.95□□□□□ -1.46
LINC00342-201ENST00000412393 LGALS2P05162 132 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 MSL3P1P0C860 447 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 CPA1P15085 419 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 FOSL2P15408 326 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 PSMA5P28066 241 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 RCAN1P53805 252 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 NAPAP54920 295 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 SP4Q02446 784 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 GABPB1Q06547 395 aaPredicted RBP5.95□□□□□ -1.46
LINC00342-201ENST00000412393 SLC20A2Q08357 652 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 RBL2Q08999 1139 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 APOBRQ0VD83 1088 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 BBS9Q3SYG4 887 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 NT5DC1Q5TFE4 455 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 WWC2Q6AWC2 1192 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 METTL7BQ6UX53 244 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 Q6ZUG5 572 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 LRRC8DQ7L1W4 858 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 SLC16A11Q8NCK7 471 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 GIMAP8Q8ND71 665 aaPredicted RBP5.95□□□□□ -1.46
LINC00342-201ENST00000412393 KIAA1524Q8TCG1 905 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 GPRASP2Q96D09 838 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 CDHR1Q96JP9 859 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 CTAGE1Q96RT6 745 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 SENP7Q9BQF6 1050 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 NKX2-4Q9H2Z4 354 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 TSPY26PQ9H489 355 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 EHMT1Q9H9B1 1298 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 PCDHA6Q9UN73 950 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 PCDHA8Q9Y5H6 950 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 SIP14410 1827 aa5.95□□□□□ -1.46
LINC00342-201ENST00000412393 COL6A3P12111 3177 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 CCDC196A0A1B0GTZ2 297 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 C17orf102A2RUQ5 167 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 hCG_1984214I3L0E3 225 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 ATP9AO75110 1047 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 PARNO95453 639 aaKnown RBP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 FOSP01100 380 aaPredicted RBP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 SYPP08247 313 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 SMIM10L2AP0DMW4 78 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 SMIM10L2BP0DMW5 78 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 CKBP12277 381 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 ATP2A2P16615 1042 aaKnown RBP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 RPS6KB1P23443 525 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 METAP2P50579 478 aaKnown RBP eCLIP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 ADCY7P51828 1080 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 RABGGTBP53611 331 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 ZNF200P98182 395 aaPredicted RBP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 TRIM71Q2Q1W2 868 aaKnown RBP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 VWA3BQ502W6 1294 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 ZNF618Q5T7W0 954 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 RPTNQ6XPR3 784 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 TEX2Q8IWB9 1127 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 PHACTR4Q8IZ21 702 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 ZNF713Q8N859 430 aaPredicted RBP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 MAFAQ8NHW3 353 aaPredicted RBP5.94□□□□□ -1.46
LINC00342-201ENST00000412393 BRF1Q92994 677 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 ATP6V0A1Q93050 837 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 SAMD11Q96NU1 681 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 SLC9A7Q96T83 725 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 MXRA8Q9BRK3 442 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 ANO3Q9BYT9 981 aa5.94□□□□□ -1.46
LINC00342-201ENST00000412393 RNF38Q9H0F5 515 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms