RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NPPAP01160 153 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 MAP3K10Q02779 954 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 GRM2Q14416 872 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 CWF19L2Q2TBE0 894 aaKnown RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 FAM205BPQ63HN1 556 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SDE2Q6IQ49 451 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 CYP2U1Q7Z449 544 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 LINC00518Q8N0U6 118 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 CNDP1Q96KN2 507 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 PHACTR3Q96KR7 559 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 MED15Q96RN5 788 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 CLPBQ9H078 707 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SLC38A10Q9HBR0 1119 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 S100A14Q9HCY8 104 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 DTLQ9NZJ0 730 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 UVRAGQ9P2Y5 699 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 PI4KBQ9UBF8 816 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 PCDHGA2Q9Y5H1 932 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SMCO2A6NFE2 343 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 TRDMT1O14717 391 aaKnown RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 TBX3O15119 743 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 HPGDP15428 266 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 TCP1P17987 556 aaKnown RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 HERVK_113P62684 666 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SGCAQ16586 387 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 WASHC2DQ5SRD0 308 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 RANBP10Q6VN20 620 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ADAMTSL2Q86TH1 951 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 TSPYL5Q86VY4 417 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 LRRC34Q8IZ02 419 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ADGRG5Q8IZF4 528 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 NAT8LQ8N9F0 302 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SPATA4Q8NEY3 305 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 DYDC2Q96IM9 177 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 PRICKLE1Q96MT3 831 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 TSG101Q99816 390 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 TUBA1CQ9BQE3 449 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 KCNN2Q9H2S1 579 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.5□□□□□ -1.533e-6■□□□□ 9.1
HERC4-205ENST00000412272 SALL4Q9UJQ4 1053 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SPG7Q9UQ90 795 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 DISP2A7MBM2 1401 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 KDM3BQ7LBC6 1761 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 A0A0G2JS52 829 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 UBAP1LF5GYI3 381 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 K7EPI3 171 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 CYP17A1P05093 508 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 OCM2P0CE71 109 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 OCMP0CE72 109 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 TRAPPC10P48553 1259 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 HCAR3P49019 387 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ATN1P54259 1190 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 PTPAQ15257 358 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 FUT11Q495W5 492 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 PPP1R21Q6ZMI0 780 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 KRT28Q7Z3Y7 464 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 TMPRSS9Q7Z410 1059 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SLC44A2Q8IWA5 706 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 PROM2Q8N271 834 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 PCYOX1LQ8NBM8 494 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.5□□□□□ -1.53
HERC4-205ENST00000412272 PIP4K2CQ8TBX8 421 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 PPP4R1Q8TF05 950 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 CEP19Q96LK0 163 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 RAB3IPQ96QF0 476 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 LRRC1Q9BTT6 524 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 TRIM8Q9BZR9 551 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 FAM117AQ9C073 453 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 C8orf33Q9H7E9 229 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 MRM3Q9HC36 420 aaKnown RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 CPNE7Q9UBL6 633 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 PRKAG2Q9UGJ0 569 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 MAN1B1Q9UKM7 699 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 MAFBQ9Y5Q3 323 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 PASKQ96RG2 1323 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 A0A1W2PQC6 194 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ATP6V1G2-DDX39BF2Z307 99 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ARIH2O95376 493 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 GJB6O95452 261 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SHBGP04278 402 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ESRRAP11474 423 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 ZNF12P17014 697 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SLC5A2P31639 672 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 SYKP43405 635 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 STAT2P52630 851 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 FOXK2Q01167 660 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 EXOSC10Q01780 885 aaKnown RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 MAP3K21Q5TCX8 1036 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 USP37Q86T82 979 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 AKAP14Q86UN6 197 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ST13P4Q8IZP2 240 aaPredicted RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 LRRC71Q8N4P6 559 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ALLCQ8N6M5 410 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 FAM13CQ8NE31 585 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 TTC8Q8TAM2 541 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 ATXN2LQ8WWM7 1075 aaKnown RBP5.5□□□□□ -1.53
HERC4-205ENST00000412272 LPPQ93052 612 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 OPALINQ96PE5 141 aa5.5□□□□□ -1.53
HERC4-205ENST00000412272 RIOK1Q9BRS2 568 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms