RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 MAPK8IP1Q9UQF2 711 aa8.85□□□□□ -0.99
RPE-204ENST00000411934 MYO7AQ13402 2215 aa8.85□□□□□ -0.99
RPE-204ENST00000411934 SCN1AP35498 2009 aa8.85□□□□□ -0.99
RPE-204ENST00000411934 PTPRJQ12913 1337 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 MTCL1Q9Y4B5 1905 aaKnown RBP8.84□□□□□ -0.99
RPE-204ENST00000411934 P4HA2O15460 535 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 HUS1O60921 280 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 N4BP1O75113 896 aaKnown RBP8.84□□□□□ -0.99
RPE-204ENST00000411934 TBX10O75333 385 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 GLP2RO95838 553 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 P4HA1P13674 534 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 CA8P35219 290 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 LTBRP36941 435 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 CASP4P49662 377 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 PMS1P54277 932 aaKnown RBP8.84□□□□□ -0.99
RPE-204ENST00000411934 NLRP12P59046 1061 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 MRPS5P82675 430 aaKnown RBP8.84□□□□□ -0.99
RPE-204ENST00000411934 TRPC3Q13507 836 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 CCDC85BQ15834 202 aaPredicted RBP8.84□□□□□ -0.99
RPE-204ENST00000411934 KLHL40Q2TBA0 621 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 KRT39Q6A163 491 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 ANKRD40Q6AI12 368 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 OVOS1Q6IE37 1185 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 ANKRD54Q6NXT1 300 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 LILRA6Q6PI73 481 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 CCDC149Q6ZUS6 474 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 TAS1R1Q7RTX1 841 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 METTL23Q86XA0 190 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 CEP57Q86XR8 500 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 RDH13Q8NBN7 331 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 OR5B17Q8NGF7 314 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 C2orf15Q8WU43 125 aaKnown RBP8.84□□□□□ -0.99
RPE-204ENST00000411934 CCDC127Q96BQ5 260 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 BORCS6Q96GS4 357 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 NECTIN4Q96NY8 510 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 CLSTN3Q9BQT9 956 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 BRWD1Q9NSI6 2320 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 ARMCX3Q9UH62 379 aaPredicted RBP8.84□□□□□ -0.99
RPE-204ENST00000411934 CD207Q9UJ71 328 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 AGAP1Q9UPQ3 857 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 CTNND2Q9UQB3 1225 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 PCDHGC5Q9Y5F6 944 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 COL6A3P12111 3177 aa8.84□□□□□ -0.99
RPE-204ENST00000411934 TRIM49BA6NDI0 452 aa8.83□□□□□ -1
RPE-204ENST00000411934 BIN1O00499 593 aa8.83□□□□□ -1
RPE-204ENST00000411934 C2CD2LO14523 706 aa8.83□□□□□ -1
RPE-204ENST00000411934 CYB561D2O14569 222 aa8.83□□□□□ -1
RPE-204ENST00000411934 PPEF2O14830 753 aa8.83□□□□□ -1
RPE-204ENST00000411934 SPTLC1O15269 473 aa8.83□□□□□ -1
RPE-204ENST00000411934 TACC1O75410 805 aa8.83□□□□□ -1
RPE-204ENST00000411934 ABLIM3O94929 683 aa8.83□□□□□ -1
RPE-204ENST00000411934 LETM1O95202 739 aaPredicted RBP8.83□□□□□ -1
RPE-204ENST00000411934 C4BPAP04003 597 aaKnown RBP8.83□□□□□ -1
RPE-204ENST00000411934 KRT19P08727 400 aa8.83□□□□□ -1
RPE-204ENST00000411934 HNRNPA1P09651 372 aaKnown RBP eCLIP8.83□□□□□ -1
RPE-204ENST00000411934 CCDC192P0DO97 292 aa8.83□□□□□ -1
RPE-204ENST00000411934 ATF2P15336 505 aa8.83□□□□□ -1
RPE-204ENST00000411934 PCSK1P29120 753 aa8.83□□□□□ -1
RPE-204ENST00000411934 LHX1P48742 406 aa8.83□□□□□ -1
RPE-204ENST00000411934 MXI1P50539 228 aa8.83□□□□□ -1
RPE-204ENST00000411934 GUCY2FP51841 1108 aa8.83□□□□□ -1
RPE-204ENST00000411934 ROR1Q01973 937 aa8.83□□□□□ -1
RPE-204ENST00000411934 BIRC3Q13489 604 aa8.83□□□□□ -1
RPE-204ENST00000411934 NCOA4Q13772 614 aa8.83□□□□□ -1
RPE-204ENST00000411934 SKOR2Q2VWA4 1001 aaPredicted RBP8.83□□□□□ -1
RPE-204ENST00000411934 CTXN3Q4LDR2 81 aa8.83□□□□□ -1
RPE-204ENST00000411934 TJAP1Q5JTD0 557 aa8.83□□□□□ -1
RPE-204ENST00000411934 LIN9Q5TKA1 542 aa8.83□□□□□ -1
RPE-204ENST00000411934 TDRD10Q5VZ19 366 aaKnown RBP8.83□□□□□ -1
RPE-204ENST00000411934 KLHL10Q6JEL2 608 aa8.83□□□□□ -1
RPE-204ENST00000411934 PRSS55Q6UWB4 352 aaPredicted RBP8.83□□□□□ -1
RPE-204ENST00000411934 RBM23Q86U06 439 aaKnown RBP8.83□□□□□ -1
RPE-204ENST00000411934 FAM114A1Q8IWE2 563 aa8.83□□□□□ -1
RPE-204ENST00000411934 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.83□□□□□ -1
RPE-204ENST00000411934 THEM5Q8N1Q8 247 aa8.83□□□□□ -1
RPE-204ENST00000411934 TTC39CQ8N584 583 aa8.83□□□□□ -1
RPE-204ENST00000411934 CCDC150Q8NCX0 1101 aa8.83□□□□□ -1
RPE-204ENST00000411934 VN1R2Q8NFZ6 395 aa8.83□□□□□ -1
RPE-204ENST00000411934 ZNF461Q8TAF7 563 aa8.83□□□□□ -1
RPE-204ENST00000411934 PLEKHO2Q8TD55 490 aa8.83□□□□□ -1
RPE-204ENST00000411934 AUTS2Q8WXX7 1259 aa8.83□□□□□ -1
RPE-204ENST00000411934 RABGGTAQ92696 567 aa8.83□□□□□ -1
RPE-204ENST00000411934 HPDLQ96IR7 371 aa8.83□□□□□ -1
RPE-204ENST00000411934 DUSP9Q99956 384 aaKnown RBP8.83□□□□□ -1
RPE-204ENST00000411934 XYLT2Q9H1B5 865 aa8.83□□□□□ -1
RPE-204ENST00000411934 CLEC1BQ9P126 229 aa8.83□□□□□ -1
RPE-204ENST00000411934 PRKAG3Q9UGI9 489 aa8.83□□□□□ -1
RPE-204ENST00000411934 FBXL5Q9UKA1 691 aa8.83□□□□□ -1
RPE-204ENST00000411934 COQ4Q9Y3A0 265 aa8.83□□□□□ -1
RPE-204ENST00000411934 CDY1Q9Y6F8 540 aa8.83□□□□□ -1
RPE-204ENST00000411934 PLXNA3P51805 1871 aa8.83□□□□□ -1
RPE-204ENST00000411934 I3L4J1 428 aa8.82□□□□□ -1
RPE-204ENST00000411934 GABRDO14764 452 aa8.82□□□□□ -1
RPE-204ENST00000411934 PER2O15055 1255 aa8.82□□□□□ -1
RPE-204ENST00000411934 TGM5O43548 720 aa8.82□□□□□ -1
RPE-204ENST00000411934 PHACTR2O75167 634 aa8.82□□□□□ -1
RPE-204ENST00000411934 ZMYND10O75800 440 aa8.82□□□□□ -1
RPE-204ENST00000411934 ASS1P00966 412 aaKnown RBP8.82□□□□□ -1
RPE-204ENST00000411934 TRIM21P19474 475 aaKnown RBP8.82□□□□□ -1
RPE-204ENST00000411934 KCNA5P22460 613 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms