RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 ZDHHC7Q9NXF8 308 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 CDH22Q9UJ99 828 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 MAN1B1Q9UKM7 699 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 DSEQ9UL01 958 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 CCDC195A0A1B0GUA6 201 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 WDR27A2RRH5 827 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 C19orf67A6NJJ6 358 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 DLL1O00548 723 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 CYB561D2O14569 222 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 RFPL2O75678 378 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 ZMYND10O75800 440 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 MTHFRP42898 656 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 UVSSAQ2YD98 709 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 OVOS1Q6IE37 1185 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 RTL10Q7L3V2 364 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 ADSSL1Q8N142 457 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 GDAP2Q9NXN4 497 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 FRMD4BQ9Y2L6 1034 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 SPDYE4A6NLX3 237 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 KRT19P08727 400 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 ATF2P15336 505 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 BMP6P22004 513 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 MCCD1P59942 119 aaPredicted RBP20.69■□□□□ 0.9
RTN4-207ENST00000402434 ADAM9Q13443 819 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 CEP135Q66GS9 1140 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 TPGS2Q68CL5 300 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 TMC2Q8TDI7 906 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 ZNF707Q96C28 371 aaPredicted RBP20.69■□□□□ 0.9
RTN4-207ENST00000402434 CD320Q9NPF0 282 aa20.69■□□□□ 0.9
RTN4-207ENST00000402434 MUC3AQ02505 3323 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 OR6C75A6NL08 312 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 AKAP3O75969 853 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 WEE2P0C1S8 567 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 HOXA9P31269 272 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 MORC3Q14149 939 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 LIN9Q5TKA1 542 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 GJD3Q8N144 294 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 PRKD2Q9BZL6 878 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 POMKQ9H5K3 350 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 LMBRD1Q9NUN5 540 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 MAFFQ9ULX9 164 aa20.68■□□□□ 0.9
RTN4-207ENST00000402434 LRRIQ3A6PVS8 624 aaPredicted RBP20.67■□□□□ 0.9
RTN4-207ENST00000402434 CST3P01034 146 aaPredicted RBP20.67■□□□□ 0.9
RTN4-207ENST00000402434 C8AP07357 584 aa20.67■□□□□ 0.9
RTN4-207ENST00000402434 HNRNPA1P09651 372 aaKnown RBP eCLIP20.67■□□□□ 0.93e-6■□□□□ 10.5
RTN4-207ENST00000402434 AP3M2P53677 418 aa20.67■□□□□ 0.9
RTN4-207ENST00000402434 ENPEPQ07075 957 aa20.67■□□□□ 0.9
RTN4-207ENST00000402434 MYO1EQ12965 1108 aa20.67■□□□□ 0.9
RTN4-207ENST00000402434 WSCD1Q658N2 575 aa20.67■□□□□ 0.9
RTN4-207ENST00000402434 ISM2Q6H9L7 571 aa20.67■□□□□ 0.9
RTN4-207ENST00000402434 HPDLQ96IR7 371 aa20.67■□□□□ 0.9
RTN4-207ENST00000402434 GBP4Q96PP9 640 aa20.67■□□□□ 0.9
RTN4-207ENST00000402434 KIAA1468Q9P260 1216 aa20.67■□□□□ 0.9
RTN4-207ENST00000402434 LOC730098B7Z3J9 87 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 IKBKBO14920 756 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 PSMC2P35998 433 aaKnown RBP20.66■□□□□ 0.9
RTN4-207ENST00000402434 PPP1R2P41236 205 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 ARPP19P56211 112 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 DLG4P78352 724 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 BFSP1Q12934 665 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 CCDC149Q6ZUS6 474 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 LIMS2Q7Z4I7 341 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 METTL23Q86XA0 190 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 TCEAL8Q8IYN2 117 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 SLC7A14Q8TBB6 771 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 DHTKD1Q96HY7 919 aaPredicted RBP20.66■□□□□ 0.9
RTN4-207ENST00000402434 RTP3Q9BQQ7 232 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 MKNK1Q9BUB5 465 aa20.66■□□□□ 0.9
RTN4-207ENST00000402434 AFF4Q9UHB7 1163 aaKnown RBP20.66■□□□□ 0.9
RTN4-207ENST00000402434 R3HCC1Q9Y3T6 440 aaKnown RBP20.66■□□□□ 0.9
RTN4-207ENST00000402434 C4BPAP04003 597 aaKnown RBP20.65■□□□□ 0.9
RTN4-207ENST00000402434 POU2F2P09086 479 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 CD44P16070 742 aaKnown RBP20.65■□□□□ 0.9
RTN4-207ENST00000402434 PMS1P54277 932 aaKnown RBP20.65■□□□□ 0.9
RTN4-207ENST00000402434 LRRC63Q05C16 580 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 GPR17Q13304 367 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 STIM1Q13586 685 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 CAMK4Q16566 473 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 PPM1LQ5SGD2 360 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 C1orf220Q5T0J3 134 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 ANKRD40Q6AI12 368 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 INTS8Q75QN2 995 aaKnown RBP20.65■□□□□ 0.9
RTN4-207ENST00000402434 DPH6Q7L8W6 267 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 ZC3H3Q8IXZ2 948 aaKnown RBP20.65■□□□□ 0.9
RTN4-207ENST00000402434 TMEM86AQ8N2M4 240 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 TRIML1Q8N9V2 468 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 SMG7Q92540 1137 aaKnown RBP20.65■□□□□ 0.9
RTN4-207ENST00000402434 SNX9Q9Y5X1 595 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 TSC2P49815 1807 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 C2orf16Q68DN1 1984 aa20.65■□□□□ 0.9
RTN4-207ENST00000402434 PPP1R3GB7ZBB8 358 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 TNFRSF10AO00220 468 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 PSMA7O14818 248 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 HUS1O60921 280 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 SEC24AO95486 1093 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 CPB1P15086 417 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 CCNE1P24864 410 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 VAMP7P51809 220 aa20.64■□□□□ 0.89
RTN4-207ENST00000402434 FKBP3Q00688 224 aaKnown RBP20.64■□□□□ 0.89
RTN4-207ENST00000402434 TDRD10Q5VZ19 366 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms