RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 RUSC1Q9BVN2 902 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 OSBPL8Q9BZF1 889 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 NDFIP2Q9NV92 336 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 DDX56Q9NY93 547 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 CFAP69A5D8W1 941 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TMEM150BA6NC51 233 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 HLA-DRAP01903 254 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ENO1P06733 434 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 PGK2P07205 417 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 RALAP11233 206 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 NCAM1P13591 858 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 CPB1P15086 417 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 HSPA9P38646 679 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 ZNF157P51786 506 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 POLE2P56282 527 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 PPP4CP60510 307 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 PAN2Q504Q3 1202 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 TFDP3Q5H9I0 405 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SPIRE2Q8WWL2 714 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 RMDN1Q96DB5 314 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 VPS39Q96JC1 886 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 NT5C1AQ9BXI3 368 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 MOV10L1Q9BXT6 1211 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 PACSIN1Q9BY11 444 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TRIM4Q9C037 500 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 UPF3AQ9H1J1 476 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 EPN3Q9H201 632 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ACTR5Q9H9F9 607 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 SCOCQ9UIL1 159 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 PCDHB2Q9Y5E7 798 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 COL14A1Q05707 1796 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 ANO9A1A5B4 782 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ZBBXA8MT70 800 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 MYO1CO00159 1063 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 NFIBO00712 420 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 EIF3DO15371 548 aaKnown RBP eCLIP3.42□□□□□ -1.86
KNL1-202ENST00000399668 MSH4O15457 936 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 DYNC1LI2O43237 492 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 PHF2O75151 1096 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 KRT38O76015 456 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 B3GAT3O94766 335 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 HSPA8P11142 646 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 PDGFRAP16234 1089 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 RECQLP46063 649 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 OR1G1P47890 313 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 HSD17B4P51659 736 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ALDH18A1P54886 795 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 TWF1Q12792 350 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SNAPC2Q13487 334 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TFDP2Q14188 446 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 DGKDQ16760 1214 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SGSM1Q2NKQ1 1148 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 DCAF4L1Q3SXM0 396 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 EFHC2Q5JST6 749 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 KIAA1755Q5JYT7 1200 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 COL23A1Q86Y22 540 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 RCOR2Q8IZ40 523 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 MDM1Q8TC05 714 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ANKS1AQ92625 1134 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 DACT3Q96B18 629 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 NRBF2Q96F24 287 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TNIP3Q96KP6 325 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 CCT8L2Q96SF2 557 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 THAP2Q9H0W7 228 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TRPV6Q9H1D0 765 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 NAGPAQ9UK23 515 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 STAP1Q9ULZ2 295 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TNS2Q63HR2 1409 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SSU72P8A0A1W2PR75 194 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ZBTB39O15060 712 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 CHEK2O96017 543 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 FDX1P10109 184 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 MYBL1P10243 752 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ARP10275 920 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SKIP12755 728 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 VEGFAP15692 232 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 CYP11B2P19099 503 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SOX11P35716 441 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 PPARGP37231 505 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 KPNA2P52292 529 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 VCPP55072 806 aaKnown RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 PSMC6P62333 389 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 CNGA3Q16281 694 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 NTRK3Q16288 839 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 RBBP7Q16576 425 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 DEFB132Q7Z7B7 95 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SPATA2LQ8IUW3 424 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 APPL2Q8NEU8 664 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SLC7A14Q8TBB6 771 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 DTX3LQ8TDB6 740 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 SNX19Q92543 992 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 L3MBTL3Q96JM7 780 aaPredicted RBP3.42□□□□□ -1.86
KNL1-202ENST00000399668 RBM15Q96T37 977 aaKnown RBP eCLIP3.42□□□□□ -1.86
KNL1-202ENST00000399668 CBWD1Q9BRT8 395 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 TIPINQ9BVW5 301 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 MAGEB5Q9BZ81 275 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 PIDD1Q9HB75 910 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 ETNK1Q9HBU6 452 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 KCNQ5Q9NR82 932 aa3.42□□□□□ -1.86
KNL1-202ENST00000399668 METTL5Q9NRN9 209 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms