RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 CD248Q9HCU0 757 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 C20orf96Q9NUD7 363 aaPredicted RBP13.79□□□□□ -0.2
ITSN1-208ENST00000399349 HMOX2P30519 316 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 ATPAF2Q8N5M1 289 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 ASAP3Q8TDY4 903 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 INPP5DQ92835 1189 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 RUSC1Q9BVN2 902 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 NT5C1AQ9BXI3 368 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 TMEM8AQ9HCN3 771 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 ARHGEF38Q9NXL2 777 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.79□□□□□ -0.2
ITSN1-208ENST00000399349 B2RBV5 119 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 FOXN3O00409 490 aaPredicted RBP13.79□□□□□ -0.2
ITSN1-208ENST00000399349 EEF2KO00418 725 aaKnown RBP13.79□□□□□ -0.2
ITSN1-208ENST00000399349 OVGP1Q12889 678 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 GLRA4Q5JXX5 417 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 EFCAB12Q6NXP0 572 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 TRPM8Q7Z2W7 1104 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 IL1RL2Q9HB29 575 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 METTL5Q9NRN9 209 aaKnown RBP13.79□□□□□ -0.2
ITSN1-208ENST00000399349 GGA3Q9NZ52 723 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
ITSN1-208ENST00000399349 RRM2BQ7LG56 351 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 GALNT4Q8N4A0 578 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 MOV10L1Q9BXT6 1211 aaKnown RBP13.78□□□□□ -0.2
ITSN1-208ENST00000399349 HPS4Q9NQG7 708 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
ITSN1-208ENST00000399349 V9GYQ6 96 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 PRPF4O43172 522 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■■□□ 15.5
ITSN1-208ENST00000399349 AKAP10O43572 662 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 SERPIND1P05546 499 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 MFSD14CQ5VZR4 134 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 CNPY4Q8N129 248 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 HNRNPLLQ8WVV9 542 aaKnown RBP13.78□□□□□ -0.2
ITSN1-208ENST00000399349 BHMTQ93088 406 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 SGSM3Q96HU1 749 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 PACSIN1Q9BY11 444 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 AGPAT3Q9NRZ7 376 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 NAGPAQ9UK23 515 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 PREX2Q70Z35 1606 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 TRPM1Q7Z4N2 1603 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 ARHGEF40Q8TER5 1519 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 ZNF197O14709 1029 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 MSH4O15457 936 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 TADA2AO75478 443 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 MYO1DO94832 1006 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 ASMTLO95671 621 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 ETFBP38117 255 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 KCNT1Q5JUK3 1230 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 SYDE1Q6ZW31 735 aaPredicted RBP13.78□□□□□ -0.2
ITSN1-208ENST00000399349 KCNB2Q92953 911 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 MTBPQ96DY7 904 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 TEKT2Q9UIF3 430 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 ARHGAP26Q9UNA1 814 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.78□□□□□ -0.2
ITSN1-208ENST00000399349 LRRC74AQ0VAA2 488 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 PTPAQ15257 358 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 TRIP10Q15642 601 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 ERGIC2Q96RQ1 377 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 TIPINQ9BVW5 301 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 CHCHD3Q9NX63 227 aaKnown RBP13.78□□□□□ -0.2
ITSN1-208ENST00000399349 PLAGL2Q9UPG8 496 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 LZTS1Q9Y250 596 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 USP31Q70CQ4 1352 aa13.78□□□□□ -0.2
ITSN1-208ENST00000399349 KIAA0391O15091 583 aaKnown RBP13.77□□□□□ -0.2
ITSN1-208ENST00000399349 ENTPD3O75355 529 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 CYP11B2P19099 503 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.2
ITSN1-208ENST00000399349 TAF1CQ15572 869 aaPredicted RBP13.77□□□□□ -0.2
ITSN1-208ENST00000399349 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 CBWD2Q8IUF1 395 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 ZNF669Q96BR6 464 aaPredicted RBP13.77□□□□□ -0.2
ITSN1-208ENST00000399349 ZNF512BQ96KM6 892 aaPredicted RBP13.77□□□□□ -0.2
ITSN1-208ENST00000399349 ZNF512Q96ME7 567 aaPredicted RBP13.77□□□□□ -0.2
ITSN1-208ENST00000399349 EIF2AQ9BY44 585 aaKnown RBP13.77□□□□□ -0.2
ITSN1-208ENST00000399349 TWF1Q12792 350 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 LRIG3Q6UXM1 1119 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 MFN1Q8IWA4 741 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 ACER1Q8TDN7 264 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 EME1Q96AY2 570 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 SEPT5Q99719 369 aaPredicted RBP13.77□□□□□ -0.2
ITSN1-208ENST00000399349 LACRTQ9GZZ8 138 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 ISCUQ9H1K1 167 aa13.77□□□□□ -0.2
ITSN1-208ENST00000399349 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.77□□□□□ -0.2
ITSN1-208ENST00000399349 HSD17B3P37058 310 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 GRB10Q13322 594 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 MAPRE2Q15555 327 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 ARID3BQ8IVW6 561 aaPredicted RBP13.77□□□□□ -0.21
ITSN1-208ENST00000399349 FAM151AQ8WW52 585 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 NIF3L1Q9GZT8 377 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 ADCY3O60266 1144 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 MED24O75448 989 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 NDUFS3O75489 264 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 ITGB3P05106 788 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 AKT1P31749 480 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 NFIAQ12857 509 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.21
ITSN1-208ENST00000399349 FEZF2Q8TBJ5 459 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms