RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 PDGFCQ9NRA1 345 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 GALNT8Q9NY28 637 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 USP18Q9UMW8 372 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 NINQ8N4C6 2090 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 C4BP0C0L5 1744 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ZC3H11AO75152 810 aaKnown RBP eCLIP2.85□□□□□ -1.95
CHD9-202ENST00000398510 ATP2C2O75185 946 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 SLC4A1P02730 911 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ALBP02768 609 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PSMC3P17980 439 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 GTF2H1P32780 548 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PPP3CCP48454 512 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PLOD1Q02809 727 aaPredicted RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 MAP2K5Q13163 448 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 SBK1Q52WX2 424 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 TDRD10Q5VZ19 366 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 SLFN13Q68D06 897 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 KRT80Q6KB66 452 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 MMGT1Q8N4V1 131 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 TMEM145Q8NBT3 493 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 OR8K1Q8NGG5 319 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 TDRD7Q8NHU6 1098 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 CCDC3Q9BQI4 270 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 UBE2OQ9C0C9 1292 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 DCDC2Q9UHG0 476 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PCDHGC3Q9UN70 934 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 POLIQ9UNA4 740 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PCDHB9Q9Y5E1 797 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ADAMTS13Q76LX8 1427 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 UMODL1Q5DID0 1318 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 SALL1Q9NSC2 1324 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 MEIS2O14770 477 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ADCY6O43306 1168 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ESRRBO95718 433 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PLA2G4BP0C869 781 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 CYP2C9P11712 490 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 HCLS1P14317 486 aaPredicted RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 CHMLP26374 656 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ADKP55263 362 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 NLRP12P59046 1061 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 RPL19P84098 196 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 YWHAHQ04917 246 aaPredicted RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 MORC3Q14149 939 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 DARS2Q6PI48 645 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 GPC2Q8N158 579 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 C3orf20Q8ND61 904 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 DCAKDQ8WVC6 231 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 HDAC2Q92769 488 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 ULK4Q96C45 1275 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 GPRASP2Q96D09 838 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 YME1L1Q96TA2 773 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 UBXN6Q9BZV1 441 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 MUC3BQ9H195 1237 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 XIRP1Q702N8 1843 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 BRCA1P38398 1863 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 C17orf102A2RUQ5 167 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PRPF4O43172 522 aaKnown RBP eCLIP2.85□□□□□ -1.95
CHD9-202ENST00000398510 ARHGEF9O43307 516 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 RPS6KA4O75676 772 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ERCC1P07992 297 aaPredicted RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 HALP42357 657 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PRAMEP78395 509 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 OCRLQ01968 901 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 RAD51AP2Q09MP3 1159 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PTPRNQ16849 979 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 INSCQ1MX18 579 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 SYCP2LQ5T4T6 812 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 TTC39BQ5VTQ0 682 aaPredicted RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 MOXD1Q6UVY6 613 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 MAPKAPK5Q8IW41 473 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 RASEFQ8IZ41 740 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 AADATQ8N5Z0 425 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 NEDD4LQ96PU5 975 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 BPIFA3Q9BQP9 254 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 COLEC11Q9BWP8 271 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 SIGLEC1Q9BZZ2 1709 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ZNF518BQ9C0D4 1074 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 SENP2Q9HC62 589 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 NPHS2Q9NP85 383 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 PRDM5Q9NQX1 630 aaPredicted RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 ITGA11Q9UKX5 1188 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ANKRD36A6QL64 1941 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 CCDC130P13994 396 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 VEGFAP15692 232 aaPredicted RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 PSMA2P25787 234 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 CDC27P30260 824 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 IFNGR2P38484 337 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 TXKP42681 527 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 NR2C2P49116 596 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 FAM83EQ2M2I3 478 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 TRIM71Q2Q1W2 868 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 RWDD4Q6NW29 188 aaKnown RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 EMBQ6PCB8 327 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 IKBIPQ70UQ0 350 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 DNAJB7Q7Z6W7 309 aaPredicted RBP2.85□□□□□ -1.95
CHD9-202ENST00000398510 CYP4Z1Q86W10 505 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ULK2Q8IYT8 1036 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ATP11CQ8NB49 1132 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 CCNYQ8ND76 341 aa2.85□□□□□ -1.95
CHD9-202ENST00000398510 ASB2Q96Q27 587 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms