RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 PCDHA8Q9Y5H6 950 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 SMIM22K7EJ46 135 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 OR6B1O95007 311 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 VCLP18206 1134 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 AMPD1P23109 780 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 HALP42357 657 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 SCNN1DP51172 638 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 IRX4P78413 519 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 ANKRD20A4Q4UJ75 823 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 UGT2A3Q6UWM9 527 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 U2AF1L4Q8WU68 220 aaKnown RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 SKA1Q96BD8 255 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 PPCSQ9HAB8 311 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 OSGEPQ9NPF4 335 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 HBS1LQ9Y450 684 aaKnown RBP12.14□□□□□ -0.47
PUM3-202ENST00000397885 LTBP1Q14766 1721 aa12.14□□□□□ -0.47
PUM3-202ENST00000397885 COL4A1P02462 1669 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 CFAP69A5D8W1 941 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 ANKRD63C9JTQ0 380 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 TP73O15350 636 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 TGDSO95455 350 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 CLPTM1O96005 669 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 SMIM18P0DKX4 95 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 KCNA4P22459 653 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 MAN1A1P33908 653 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 ARFIP2P53365 341 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 HTRA3P83110 453 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 ZNF211Q13398 564 aaPredicted RBP12.13□□□□□ -0.47
PUM3-202ENST00000397885 PDK3Q15120 406 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 EDRF1Q3B7T1 1238 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 THOC7Q6I9Y2 204 aaKnown RBP12.13□□□□□ -0.47
PUM3-202ENST00000397885 DHRS4L2Q6PKH6 230 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 FRMD5Q7Z6J6 570 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 ALLCQ8N6M5 410 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 DDI1Q8WTU0 396 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 FAM172AQ8WUF8 416 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 ZNF75CPQ92670 426 aaPredicted RBP12.13□□□□□ -0.47
PUM3-202ENST00000397885 CGREF1Q99674 301 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 MRPS26Q9BYN8 205 aaKnown RBP12.13□□□□□ -0.47
PUM3-202ENST00000397885 DCP1AQ9NPI6 582 aaPredicted RBP12.13□□□□□ -0.47
PUM3-202ENST00000397885 NINJ2Q9NZG7 142 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 KIAA1522Q9P206 1035 aaPredicted RBP12.13□□□□□ -0.47
PUM3-202ENST00000397885 POLLQ9UGP5 575 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 ZNF180Q9UJW8 692 aa12.13□□□□□ -0.47
PUM3-202ENST00000397885 ADAMTS3O15072 1205 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 PEX1O43933 1283 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 NMT2O60551 498 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 SPAG7O75391 227 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 TM7SF2O76062 418 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 TFAP2AP05549 437 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 PYGMP11217 842 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
PUM3-202ENST00000397885 RASA2Q15283 850 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 CCDC153Q494R4 210 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 DNAL1Q4LDG9 190 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 SBK1Q52WX2 424 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 PACS1Q6VY07 963 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 KYAT3Q6YP21 454 aaKnown RBP12.12□□□□□ -0.47
PUM3-202ENST00000397885 TREML1Q86YW5 311 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 SNF8Q96H20 258 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 CDK5RAP3Q96JB5 506 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 DHRS1Q96LJ7 313 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 TRIM55Q9BYV6 548 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 FOXP3Q9BZS1 431 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 KLHL4Q9C0H6 718 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 PLGRKTQ9HBL7 147 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 GPRC5DQ9NZD1 345 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 MAST2Q6P0Q8 1798 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 RIMBP2O15034 1052 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 TRMUO75648 421 aaKnown RBP12.12□□□□□ -0.47
PUM3-202ENST00000397885 STK10O94804 968 aaKnown RBP12.12□□□□□ -0.47
PUM3-202ENST00000397885 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
PUM3-202ENST00000397885 CETPP11597 493 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 PON1P27169 355 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 CDK16Q00536 496 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 PPIDQ08752 370 aaKnown RBP12.12□□□□□ -0.47
PUM3-202ENST00000397885 GRB10Q13322 594 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 LPIN1Q14693 890 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 INF2Q27J81 1249 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 MARVELD2Q8N4S9 558 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 SCAIQ8N9R8 606 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 NSUN4Q96CB9 384 aaKnown RBP12.12□□□□□ -0.47
PUM3-202ENST00000397885 FAM161BQ96MY7 647 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 BIRC8Q96P09 236 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 ZSWIM1Q9BR11 485 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 STK33Q9BYT3 514 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 ZC3H12CQ9C0D7 883 aaKnown RBP12.12□□□□□ -0.47
PUM3-202ENST00000397885 NPHS2Q9NP85 383 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 GPCPD1Q9NPB8 672 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
PUM3-202ENST00000397885 HEY2Q9UBP5 337 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
PUM3-202ENST00000397885 NPHP3-ACAD11A0A0J9YXS1 232 aa12.11□□□□□ -0.47
PUM3-202ENST00000397885 ANKRD62A6NC57 917 aa12.11□□□□□ -0.47
PUM3-202ENST00000397885 SORBS3O60504 671 aa12.11□□□□□ -0.47
PUM3-202ENST00000397885 ZBED1O96006 694 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms