RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PRKCQQ04759 706 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 ADCY1Q08828 1119 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 ZBTB6Q15916 424 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 CTXN3Q4LDR2 81 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 RNF19BQ6ZMZ0 732 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 TPRG1Q6ZUI0 275 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 RTL10Q7L3V2 364 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
NEDD8-202ENST00000396828 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 SUMF1Q8NBK3 374 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 RMDN1Q96DB5 314 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 SHDQ96IW2 340 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 LRRC27Q9C0I9 530 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 AVENQ9NQS1 362 aaPredicted RBP11.23□□□□□ -0.61
NEDD8-202ENST00000396828 SPATA6Q9NWH7 488 aaPredicted RBP11.23□□□□□ -0.61
NEDD8-202ENST00000396828 GDE1Q9NZC3 331 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 STK17AQ9UEE5 414 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 SERTAD1Q9UHV2 236 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 NUB1Q9Y5A7 615 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 ANK1P16157 1881 aa11.23□□□□□ -0.61
NEDD8-202ENST00000396828 A0A087X0B3 334 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 TTC26A0AVF1 554 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
NEDD8-202ENST00000396828 FAM189A1O60320 539 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 ELF1P32519 619 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 VIPR2P41587 438 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 MCL1Q07820 350 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 TWF1Q12792 350 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 NOLC1Q14978 699 aaKnown RBP eCLIP11.22□□□□□ -0.61
NEDD8-202ENST00000396828 E2F4Q16254 413 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 TMEM119Q4V9L6 283 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 GPIHBP1Q8IV16 184 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 ELSPBP1Q96BH3 223 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 RSPRY1Q96DX4 576 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 ASB16Q96NS5 453 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 BCO2Q9BYV7 579 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 C17orf75Q9HAS0 396 aa11.22□□□□□ -0.61
NEDD8-202ENST00000396828 F5P12259 2224 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 LAMA1P25391 3075 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 SYCE3A1L190 88 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 LACTBL1A8MY62 500 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 H7C4K7 107 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 M0QZQ0 153 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 CLDN3O15551 220 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 SMC2O95347 1197 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 MYL1P05976 194 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 MYL4P12829 197 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 NCKAP1LP55160 1127 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 PFKPQ01813 784 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 CSTF1Q05048 431 aaKnown RBP11.21□□□□□ -0.61
NEDD8-202ENST00000396828 STRN3Q13033 797 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 DHX8Q14562 1220 aaKnown RBP11.21□□□□□ -0.61
NEDD8-202ENST00000396828 POSTNQ15063 836 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 TEAD2Q15562 447 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.61
NEDD8-202ENST00000396828 TPGS2Q68CL5 300 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 ZNF280DQ6N043 979 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 SLC39A4Q6P5W5 647 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 SASS6Q6UVJ0 657 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 VITQ6UXI7 678 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 ZPBP2Q6X784 338 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 SV2BQ7L1I2 683 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 HAUS6Q7Z4H7 955 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 BEST2Q8NFU1 509 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 LARP4BQ92615 738 aaKnown RBP11.21□□□□□ -0.61
NEDD8-202ENST00000396828 CLDN23Q96B33 292 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 PAGE5Q96GU1 130 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 PGLYRP2Q96PD5 576 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 TMEM209Q96SK2 561 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 REEP2Q9BRK0 252 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 LRRC3Q9BY71 257 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 OSBPL6Q9BZF3 934 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 DNAJC25Q9H1X3 360 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 IKZF4Q9H2S9 585 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 SEMA4AQ9H3S1 761 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 PCDHB8Q9UN66 801 aa11.21□□□□□ -0.61
NEDD8-202ENST00000396828 NCOR2Q9Y618 2525 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
NEDD8-202ENST00000396828 TISP43B9A030 160 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 SPTLC1O15269 473 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 LAMTOR5O43504 91 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 SOAT2O75908 522 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 OAZ2O95190 189 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 CPB1P15086 417 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 LRPAP1P30533 357 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 MATR3P43243 847 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEDD8-202ENST00000396828 AFMP43652 599 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 AARSP49588 968 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEDD8-202ENST00000396828 EPHA5P54756 1037 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 MTAPQ13126 283 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 WDR44Q5JSH3 913 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 STXBP5Q5T5C0 1151 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 RBM43Q6ZSC3 357 aaKnown RBP11.2□□□□□ -0.62
NEDD8-202ENST00000396828 PDZD4Q76G19 769 aaPredicted RBP11.2□□□□□ -0.62
NEDD8-202ENST00000396828 TMC8Q8IU68 726 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 MAP4K3Q8IVH8 894 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 TTC9BQ8N6N2 239 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 RAD54LQ92698 747 aa11.2□□□□□ -0.62
NEDD8-202ENST00000396828 NELL1Q92832 810 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms