RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 TMEM63BQ5T3F8 832 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 DCUN1D2Q6PH85 259 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 TMEM121Q9BTD3 319 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 PITPNM3Q9BZ71 974 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 NSRP1Q9H0G5 558 aaKnown RBP9.85□□□□□ -0.83
NDE1-201ENST00000396354 BTBD7Q9P203 1132 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 PCSK1NQ9UHG2 260 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 NAALADL1Q9UQQ1 740 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 SNCAIPQ9Y6H5 919 aa9.85□□□□□ -0.83
NDE1-201ENST00000396354 MYH9P35579 1960 aaKnown RBP9.85□□□□□ -0.83
NDE1-201ENST00000396354 C2orf71A6NGG8 1288 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 PODXLO00592 558 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 TLR3O15455 904 aaKnown RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 USP2O75604 605 aaPredicted RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 WEE2P0C1S8 567 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 MAPTP10636 758 aaKnown RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 CD19P15391 556 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 CA4P22748 312 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 GCLCP48506 637 aaPredicted RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 MDH1BQ5I0G3 518 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 TXNRD3NBQ6F5E7 133 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 FITM2Q8N6M3 262 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 PARD3BQ8TEW8 1205 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 ERP27Q96DN0 273 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 C12orf42Q96LP6 360 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 TMEM206Q9H813 350 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 ACTR5Q9H9F9 607 aaPredicted RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 AAASQ9NRG9 546 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 GEMIN8Q9NWZ8 242 aaKnown RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 NXF1Q9UBU9 619 aaKnown RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 HAO1Q9UJM8 370 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 A0A0G2JMZ2 1700 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 LRRC37A2A6NM11 1700 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 CBX6O95503 412 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 KRT19P08727 400 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 ELF1P32519 619 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 NLRP11P59045 1033 aaKnown RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 PRKCEQ02156 737 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 VGLL4Q14135 290 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 NLRX1Q86UT6 975 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.84□□□□□ -0.83
NDE1-201ENST00000396354 KIFAP3Q92845 792 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 RNF19AQ9NV58 838 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 DNPEPQ9ULA0 475 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 SUN1O94901 812 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 ANP32DO95626 131 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 AGTP01019 485 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 KRT1P04264 644 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 PDHA1P08559 390 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 RARGP13631 454 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 CCND2P30279 289 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 ARSEP51690 589 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 ACTR2P61160 394 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 IRX4P78413 519 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 CDR2Q01850 454 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 DRP2Q13474 957 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 SLMAPQ14BN4 828 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 NBPF20Q3BBV1 942 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 BRDTQ58F21 947 aaPredicted RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 WDR44Q5JSH3 913 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 WDR78Q5VTH9 848 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 ABHD15Q6UXT9 468 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 SPATA21Q7Z572 469 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 ERICH1Q86X53 443 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 MAP4K3Q8IVH8 894 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 MCEEQ96PE7 176 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 WNT8AQ9H1J5 351 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 NINJ2Q9NZG7 142 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 USP15Q9Y4E8 981 aaPredicted RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 PCDHA10Q9Y5I2 948 aa9.84□□□□□ -0.83
NDE1-201ENST00000396354 LAMA2P24043 3122 aaKnown RBP9.84□□□□□ -0.83
NDE1-201ENST00000396354 HTTP42858 3142 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 F8VP50 259 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 CES2O00748 559 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 SNX3O60493 162 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 KRT76Q01546 638 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 C12orf56Q8IXR9 622 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 FAM71AQ8IYT1 594 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 ZNF516Q92618 1163 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 SNF8Q96H20 258 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 CLMNQ96JQ2 1002 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 TARS2Q9BW92 718 aaKnown RBP9.83□□□□□ -0.84
NDE1-201ENST00000396354 ST6GALNAC4Q9H4F1 302 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 YY1AP1Q9H869 796 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 JPH1Q9HDC5 661 aaPredicted RBP9.83□□□□□ -0.84
NDE1-201ENST00000396354 KLHL14Q9P2G3 628 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 GTF3C4Q9UKN8 822 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 AGTPBP1Q9UPW5 1226 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 MCM3APO60318 1980 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 A0A0G2JND7 137 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 A0A1W2PPM1 405 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 SRGAP2CP0DJJ0 459 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 GNA15P30679 374 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 JAK3P52333 1124 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 PKN2Q16513 984 aaKnown RBP9.83□□□□□ -0.84
NDE1-201ENST00000396354 VSTM1Q6UX27 236 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 EMC1Q8N766 993 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 HELQQ8TDG4 1101 aa9.83□□□□□ -0.84
NDE1-201ENST00000396354 PCYT2Q99447 389 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms