RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CYP4F8P98187 520 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 TOB2Q14106 344 aaPredicted RBP10.55□□□□□ -0.72
IFT88-203ENST00000389373 PPP2R5AQ15172 486 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 PADI6Q6TGC4 694 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 DNAJB7Q7Z6W7 309 aaPredicted RBP10.55□□□□□ -0.72
IFT88-203ENST00000389373 FAM177A1Q8N128 213 aaPredicted RBP10.55□□□□□ -0.72
IFT88-203ENST00000389373 ACAP3Q96P50 834 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 NACC1Q96RE7 527 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 TCHPQ9BT92 498 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 MKNK1Q9BUB5 465 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 DNAJC25Q9H1X3 360 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 TPCN1Q9ULQ1 816 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 MAFFQ9ULX9 164 aa10.55□□□□□ -0.72
IFT88-203ENST00000389373 TAF4O00268 1085 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 CDC45O75419 566 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 MED24O75448 989 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 PRAMEF12O95522 483 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 CYP11B2P19099 503 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 CSRP1P21291 193 aaKnown RBP10.54□□□□□ -0.72
IFT88-203ENST00000389373 U2AF2P26368 475 aaKnown RBP eCLIP10.54□□□□□ -0.72
IFT88-203ENST00000389373 RPL9P32969 192 aaKnown RBP10.54□□□□□ -0.72
IFT88-203ENST00000389373 HSPA4P34932 840 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 MCM2P49736 904 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 EVCP57679 992 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 IRX4P78413 519 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 YWHAHQ04917 246 aaPredicted RBP10.54□□□□□ -0.72
IFT88-203ENST00000389373 NR5A1Q13285 461 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 RUNX3Q13761 415 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 KARSQ15046 597 aaKnown RBP10.54□□□□□ -0.72
IFT88-203ENST00000389373 ZNF568Q3ZCX4 644 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 BMP2KLQ5H9B9 411 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 TMEM196Q5HYL7 178 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 TRIM68Q6AZZ1 485 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 ALKAL1Q6UXT8 129 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 GAREM2Q75VX8 874 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 USP37Q86T82 979 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 TMEM130Q8N3G9 435 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 TTC16Q8NEE8 873 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 RPLP0P6Q8NHW5 317 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 KCNB2Q92953 911 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 ZNF274Q96GC6 653 aaPredicted RBP10.54□□□□□ -0.72
IFT88-203ENST00000389373 TPSD1Q9BZJ3 242 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 CDT1Q9H211 546 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 CRISPLD1Q9H336 500 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 EBF3Q9H4W6 596 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 SLC32A1Q9H598 525 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 FBRSL1Q9HCM7 1045 aaKnown RBP10.54□□□□□ -0.72
IFT88-203ENST00000389373 OBP2AQ9NY56 170 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 KLK13Q9UKR3 277 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 TNFSF13BQ9Y275 285 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 FAM208BQ5VWN6 2430 aa10.54□□□□□ -0.72
IFT88-203ENST00000389373 CNOT1A5YKK6 2376 aaKnown RBP10.53□□□□□ -0.72
IFT88-203ENST00000389373 SPAARA0A1B0GVQ0 90 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 CCDC169A6NNP5 214 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 CDX4O14627 284 aaPredicted RBP10.53□□□□□ -0.72
IFT88-203ENST00000389373 VNN2O95498 520 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 SPATA31C1P0DKV0 1188 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 MAPK8P45983 427 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 DHPSP49366 369 aaPredicted RBP10.53□□□□□ -0.72
IFT88-203ENST00000389373 GALK1P51570 392 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 EFNA5P52803 228 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 DMC1Q14565 340 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 TAF12Q16514 161 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 SEZ6Q53EL9 994 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 XKR4Q5GH76 650 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 DSTYKQ6XUX3 929 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 RUFY3Q7L099 469 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 CYP2U1Q7Z449 544 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 TTC30AQ86WT1 665 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 CATSPER3Q86XQ3 398 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 TTC9BQ8N6N2 239 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 ATAD1Q8NBU5 361 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 PIGKQ92643 395 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 CHFRQ96EP1 664 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 GCNAQ96QF7 691 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 TASP1Q9H6P5 420 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 TUFT1Q9NNX1 390 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
IFT88-203ENST00000389373 NEUROG3Q9Y4Z2 214 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 FRYQ5TBA9 3013 aa10.53□□□□□ -0.72
IFT88-203ENST00000389373 TRDMT1O14717 391 aaKnown RBP10.52□□□□□ -0.73
IFT88-203ENST00000389373 MEFVO15553 781 aaPredicted RBP10.52□□□□□ -0.73
IFT88-203ENST00000389373 NEMFO60524 1076 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 APBB3O95704 486 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 FGF19O95750 216 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 ARSAP15289 507 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 KCNE1P15382 129 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 KRT2P35908 639 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 FOSBP53539 338 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 SIM1P81133 766 aaPredicted RBP10.52□□□□□ -0.73
IFT88-203ENST00000389373 AMPD2Q01433 879 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 SPAG1Q07617 926 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 USP39Q53GS9 565 aaKnown RBP10.52□□□□□ -0.73
IFT88-203ENST00000389373 NAIF1Q69YI7 327 aaPredicted RBP10.52□□□□□ -0.73
IFT88-203ENST00000389373 CENPPQ6IPU0 288 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 ITIH5Q86UX2 942 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 GIPC2Q8TF65 315 aa10.52□□□□□ -0.73
IFT88-203ENST00000389373 PSMG2Q969U7 264 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms