RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ZBTB39O15060 712 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 TLR2O60603 784 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 RGS2P41220 211 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 PLEKHA8Q96JA3 519 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 ZSCAN32Q9NX65 697 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 ZNF804BA4D1E1 1349 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 GALCP54803 685 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 EPS8L3Q8TE67 593 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 CAVIN3Q969G5 261 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 PUS3Q9BZE2 481 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 IPPQ9Y573 584 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 SNX13Q9Y5W8 968 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 KNL1Q8NG31 2342 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 HECW2Q9P2P5 1572 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 ATP10BO94823 1461 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 POTECB2RU33 542 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 ZNF23P17027 643 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 DPYDQ12882 1025 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 IRGCQ6NXR0 463 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 NOL6Q9H6R4 1146 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 V9GYQ6 96 aa12.97□□□□□ -0.33
SRGAP3-202ENST00000383836 NEDD4P46934 1319 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 EMSYQ7Z589 1322 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 UBA6A0AVT1 1052 aaPredicted RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 THRAP10827 490 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 DYNLL1P63167 89 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 FAM102AQ5T9C2 384 aaPredicted RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 MTDHQ86UE4 582 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 BTN2A2Q8WVV5 523 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 REXO4Q9GZR2 422 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 SPATA2Q9UM82 520 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 C2CD2Q9Y426 696 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 SARSP49591 514 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 CENPCQ03188 943 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 RASA2Q15283 850 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 PREPLQ4J6C6 727 aaPredicted RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 EFHC2Q5JST6 749 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 EFHC1Q5JVL4 640 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 SNX30Q5VWJ9 437 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 BNC2Q6ZN30 1099 aaPredicted RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 REXO1L1PQ8IX06 675 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 RTL3Q8N8U3 475 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 CALML6Q8TD86 181 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 RAB6BQ9NRW1 208 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 DKK3Q9UBP4 350 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 APEX2Q9UBZ4 518 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 ADAM30Q9UKF2 790 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 S100A9P06702 114 aaKnown RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 USP11P51784 963 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 OR6B3Q8NGW1 331 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 C1orf50Q9BV19 199 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 CHD1O14646 1710 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 KANSL1LA0AUZ9 987 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 SYNDIG1LA6NDD5 238 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 PSTPIP1O43586 416 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 KRT6AP02538 564 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 FCGR1AP12314 374 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 SERPINB5P36952 375 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 PEX5P50542 639 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 TAF2Q6P1X5 1199 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 KLHL23Q8NBE8 558 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 HMG20AQ9NP66 347 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 SLC8A2Q9UPR5 921 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 M0QYV0 167 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 BMP3P12645 472 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 RBBP8Q99708 897 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 SPRTNQ9H040 489 aaPredicted RBP12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 EFCAB1Q9HAE3 211 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 COPG2Q9UBF2 871 aa12.96□□□□□ -0.33
SRGAP3-202ENST00000383836 CEBPAP49715 358 aaPredicted RBP12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 STAP1Q9ULZ2 295 aa12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 KCNQ3O43525 872 aa12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 ZNF862O60290 1169 aa12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 APOA4P06727 396 aa12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 YY1P25490 414 aa12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 PIGHQ14442 188 aaPredicted RBP12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 PPP4R4Q6NUP7 873 aa12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 ZCCHC7Q8N3Z6 543 aaKnown RBP12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 RIN3Q8TB24 985 aa12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 PAGR1Q9BTK6 254 aa12.96□□□□□ -0.34
SRGAP3-202ENST00000383836 USP17L3A6NCW0 530 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 USP17L4A6NCW7 530 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 NUP62P37198 522 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 GPR162Q16538 588 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 USP17L1Q7RTZ2 530 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 QKIQ96PU8 341 aaKnown RBP eCLIP12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 DEPDC7Q96QD5 511 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 MMTAG2Q9BU76 263 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 VPS33BQ9H267 617 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 DHX35Q9H5Z1 703 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 MAP1BP46821 2468 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 SNPHO15079 494 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 TCF3P15923 654 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 SPRP35270 261 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 PRELPP51888 382 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 ANKS1AQ92625 1134 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
SRGAP3-202ENST00000383836 PDS5AQ29RF7 1337 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms