RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PAX3P23760 479 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 MYO1EQ12965 1108 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 TRPC3Q13507 836 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 RARS2Q5T160 578 aaKnown RBP20.86■□□□□ 0.93
GTF3A-201ENST00000381140 OVOS1Q6IE37 1185 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 PTCRAQ6ISU1 281 aaPredicted RBP20.86■□□□□ 0.93
GTF3A-201ENST00000381140 LRSAM1Q6UWE0 723 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 TMEM184AQ6ZMB5 413 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 INTS8Q75QN2 995 aaKnown RBP20.86■□□□□ 0.93
GTF3A-201ENST00000381140 METTL23Q86XA0 190 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.86■□□□□ 0.93
GTF3A-201ENST00000381140 MSLNLQ96KJ4 702 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 FBXL5Q9UKA1 691 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 SNX9Q9Y5X1 595 aa20.86■□□□□ 0.93
GTF3A-201ENST00000381140 MAPK13O15264 365 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 TYMPP19971 482 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 MRPL58Q14197 206 aaKnown RBP20.85■□□□□ 0.93
GTF3A-201ENST00000381140 TDRD10Q5VZ19 366 aaKnown RBP20.85■□□□□ 0.93
GTF3A-201ENST00000381140 WSCD1Q658N2 575 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 SYCE2Q6PIF2 218 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 BORCS6Q96GS4 357 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 DZANK1Q9NVP4 752 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 HUS1O60921 280 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 CST3P01034 146 aaPredicted RBP20.85■□□□□ 0.93
GTF3A-201ENST00000381140 CPB1P15086 417 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 AP3M2P53677 418 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 MYL6P60660 151 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 DCAF17Q5H9S7 520 aaPredicted RBP20.85■□□□□ 0.93
GTF3A-201ENST00000381140 TTI2Q6NXR4 508 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 ELMSAN1Q6PJG2 1045 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 KREMEN2Q8NCW0 462 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 DUSP9Q99956 384 aaKnown RBP20.85■□□□□ 0.93
GTF3A-201ENST00000381140 FUCA2Q9BTY2 467 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 MKNK1Q9BUB5 465 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 DSEQ9UL01 958 aa20.85■□□□□ 0.93
GTF3A-201ENST00000381140 DOCK6Q96HP0 2047 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 GRXCR2A6NFK2 248 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 OAZ2O95190 189 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 WEE2P0C1S8 567 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 OR4Q2P0C623 313 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 HOXB8P17481 243 aaPredicted RBP20.84■□□□□ 0.93
GTF3A-201ENST00000381140 GCLMP48507 274 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 CLDN10P78369 228 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 ROR1Q01973 937 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 SMAD4Q13485 552 aaKnown RBP20.84■□□□□ 0.93
GTF3A-201ENST00000381140 RAB33AQ14088 237 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 GSE1Q14687 1217 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 CCDC40Q4G0X9 1142 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 C1orf220Q5T0J3 134 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 TCERG1LQ5VWI1 586 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 TMC5Q6UXY8 1006 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 ZC3H3Q8IXZ2 948 aaKnown RBP20.84■□□□□ 0.93
GTF3A-201ENST00000381140 MLKLQ8NB16 471 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 ELMO3Q96BJ8 720 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 CDH22Q9UJ99 828 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 L1RE1Q9UN81 338 aa20.84■□□□□ 0.93
GTF3A-201ENST00000381140 SLC16A3O15427 465 aaKnown RBP20.83■□□□□ 0.92
GTF3A-201ENST00000381140 MBTPS2O43462 519 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 C4BPAP04003 597 aaKnown RBP20.83■□□□□ 0.92
GTF3A-201ENST00000381140 CYP11A1P05108 521 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 IL9P15248 144 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 PIK3CAP42336 1068 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 CDR1P51861 262 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 NLRP12P59046 1061 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 PPP3CAQ08209 521 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 NCOA4Q13772 614 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 DPCR1Q3MIW9 517 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 LIN9Q5TKA1 542 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 SLC8B1Q6J4K2 584 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 LILRA6Q6PI73 481 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 PDCL2Q8N4E4 241 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 SMRP1Q8NCR6 262 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 MMS19Q96T76 1030 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 SFXN1Q9H9B4 322 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.83■□□□□ 0.92
GTF3A-201ENST00000381140 FBXW11Q9UKB1 542 aa20.83■□□□□ 0.92
GTF3A-201ENST00000381140 USP15Q9Y4E8 981 aaPredicted RBP20.83■□□□□ 0.92
GTF3A-201ENST00000381140 WDR27A2RRH5 827 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 IKBKBO14920 756 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 TBC1D4O60343 1298 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 RFPL2O75678 378 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 ZNF699Q32M78 642 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 TJAP1Q5JTD0 557 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 CES5AQ6NT32 575 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 SV2AQ7L0J3 742 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 THEM5Q8N1Q8 247 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 FEZF2Q8TBJ5 459 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 CEP63Q96MT8 703 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 TMEM209Q96SK2 561 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 PLEKHA4Q9H4M7 779 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 GDAP2Q9NXN4 497 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 NXF1Q9UBU9 619 aaKnown RBP20.82■□□□□ 0.92
GTF3A-201ENST00000381140 ARMCX3Q9UH62 379 aaPredicted RBP20.82■□□□□ 0.92
GTF3A-201ENST00000381140 DPP7Q9UHL4 492 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 RWDD2AQ9UIY3 292 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 FAM50BQ9Y247 325 aa20.82■□□□□ 0.92
GTF3A-201ENST00000381140 OR6C75A6NL08 312 aa20.81■□□□□ 0.92
GTF3A-201ENST00000381140 VNN1O95497 513 aa20.81■□□□□ 0.92
GTF3A-201ENST00000381140 CCDC192P0DO97 292 aa20.81■□□□□ 0.92
GTF3A-201ENST00000381140 ELF1P32519 619 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms