RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 SESN2P58004 480 aaPredicted RBP17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 CEP78Q5JTW2 689 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 ARHGEF1Q92888 912 aaKnown RBP17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 KCNB2Q92953 911 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 BRD8Q9H0E9 1235 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZNF302Q9NR11 478 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 ERBB3P21860 1342 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 ATP9BO43861 1147 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 FAM200BP0CF97 657 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 MXD4Q14582 209 aaPredicted RBP17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 EFHC1Q5JVL4 640 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 ARID3BQ8IVW6 561 aaPredicted RBP17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZNF512BQ96KM6 892 aaPredicted RBP17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 SP110Q9HB58 689 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 KLHL11Q9NVR0 708 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 NPHP3-ACAD11A0A0J9YXS1 232 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 C3orf70A6NLC5 250 aaPredicted RBP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 RPS6KA5O75582 802 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 CTDNEP1O95476 244 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 PAX7P23759 505 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 FAM98CQ17RN3 349 aaKnown RBP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 RABL6Q3YEC7 729 aaPredicted RBP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 SUSD4Q5VX71 490 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 ABI1Q8IZP0 508 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 SH3TC2Q8TF17 1288 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 ATXN7L3BQ96GX2 97 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 MMADHCQ9H3L0 296 aaPredicted RBP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 B4GALNT2Q8NHY0 566 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 CPA5Q8WXQ8 436 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 RBBP8Q99708 897 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 UTP6Q9NYH9 597 aaKnown RBP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 NMT1P30419 496 aaKnown RBP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 SOX6P35712 828 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 PREPLQ4J6C6 727 aaPredicted RBP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 BNC2Q6ZN30 1099 aaPredicted RBP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 MSL3Q8N5Y2 521 aaKnown RBP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 ELMO2Q96JJ3 720 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 CASS4Q9NQ75 786 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 CNGB3Q9NQW8 809 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 FXR2P51116 673 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 SLC30A5Q8TAD4 765 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 RMDN1Q96DB5 314 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 REEP2Q9BRK0 252 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 KLHL25Q9H0H3 589 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 SLC24A2Q9UI40 661 aa17.86■□□□□ 0.45
COL4A3BP-203ENST00000380494 F5H423 210 aaPredicted RBP17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 FAM58BPP0C7Q3 252 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 FOXO4P98177 505 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 MEI1Q5TIA1 1274 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 CLEC4GQ6UXB4 293 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 CROCCP3Q8IVE0 287 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 MICU2Q8IYU8 434 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 NEDD1Q8NHV4 660 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 CALML6Q8TD86 181 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 STXBP2Q15833 593 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 MAP3K14Q99558 947 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 AP5M1Q9H0R1 490 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 ABCF3Q9NUQ8 709 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 ARHGEF38Q9NXL2 777 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 AENQ8WTP8 325 aaKnown RBP17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 NMD3Q96D46 503 aaKnown RBP17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 RIC8BQ9NVN3 520 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZMYND8Q9ULU4 1186 aaPredicted RBP17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 KPNA4O00629 521 aaPredicted RBP17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 QRICH1Q2TAL8 776 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZNF513Q8N8E2 541 aaPredicted RBP17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 MCEEQ96PE7 176 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 EFCAB1Q9HAE3 211 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 RGL1Q9NZL6 768 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 PCDHB2Q9Y5E7 798 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 SLC9A1P19634 815 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 TCN1P20061 433 aaPredicted RBP17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 C4BPBP20851 252 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 EFNA5P52803 228 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 FOXD4Q12950 439 aaPredicted RBP17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 OR6P1Q8NGX9 317 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 GTF3C4Q9UKN8 822 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 HPSEQ9Y251 543 aa17.85■□□□□ 0.45
COL4A3BP-203ENST00000380494 CLRN2A0PK11 232 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZSCAN9O15535 394 aaPredicted RBP17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 P3H2Q8IVL5 708 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 RIN3Q8TB24 985 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZNF483Q8TF39 744 aaPredicted RBP17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 MPP4Q96JB8 637 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 VPS50Q96JG6 964 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 TMEM120AQ9BXJ8 343 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 NFIBO00712 420 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 LZTS3O60299 673 aaPredicted RBP17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 CNTFP26441 200 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 OASLQ15646 514 aaKnown RBP17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 PTPRN2Q92932 1015 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 TRIM63Q969Q1 353 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 RMDN3Q96TC7 470 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 ILKAPQ9H0C8 392 aaPredicted RBP17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 BTBD7Q9P203 1132 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 F8VZ95 297 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 FCGR1AP12314 374 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 RRM2BQ7LG56 351 aa17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 CCDC60Q8IWA6 550 aaPredicted RBP17.84■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZKSCAN4Q969J2 545 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms