RNA–Protein interactions for RNA: ENST00000378588.4

CYBB-201, Transcript of cytochrome b-245 beta chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYBB, Length 4,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBB-201ENST00000378588 SPDYCQ5MJ68 293 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 PPIL6Q8IXY8 311 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 IQCKQ8N0W5 287 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 CERS5Q8N5B7 392 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 C1orf131Q8NDD1 294 aaKnown RBP6.5□□□□□ -1.37
CYBB-201ENST00000378588 SPIRE2Q8WWL2 714 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 HSD17B14Q9BPX1 270 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 TTYH3Q9C0H2 523 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 KDM4CQ9H3R0 1056 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 NPHS2Q9NP85 383 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 PAK5Q9P286 719 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 DDX20Q9UHI6 824 aaKnown RBP6.5□□□□□ -1.37
CYBB-201ENST00000378588 G3BP2Q9UN86 482 aaKnown RBP6.5□□□□□ -1.37
CYBB-201ENST00000378588 SCAF8Q9UPN6 1271 aaKnown RBP6.5□□□□□ -1.37
CYBB-201ENST00000378588 NALCNQ8IZF0 1738 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 BCL9LQ86UU0 1499 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 ASB14A6NK59 587 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 RBAK-RBAKDNI3L0D1 243 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 PIK3CDO00329 1044 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 OGTO15294 1046 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 DIAPH2O60879 1101 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 IL18RAPO95256 599 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 SPATA31C1P0DKV0 1188 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 RARAP10276 462 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 BRD2P25440 801 aaKnown RBP6.5□□□□□ -1.37
CYBB-201ENST00000378588 ECM1Q16610 540 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 BMT2Q1RMZ1 405 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 ATF7IP2Q5U623 682 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 C1orf146Q5VVC0 180 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 LVRNQ6Q4G3 990 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 DSTYKQ6XUX3 929 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 ARHGEF19Q8IW93 802 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 KIF2BQ8N4N8 673 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 ETNPPLQ8TBG4 499 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 TATDN2Q93075 761 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 HDAC11Q96DB2 347 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 OTUD5Q96G74 571 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 VPS39Q96JC1 886 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 FAM161BQ96MY7 647 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 MMP19Q99542 508 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 EFHD1Q9BUP0 239 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 FRMD8Q9BZ67 464 aaPredicted RBP6.5□□□□□ -1.37
CYBB-201ENST00000378588 TRIM4Q9C037 500 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 ZNF518BQ9C0D4 1074 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 UBN1Q9NPG3 1134 aa6.5□□□□□ -1.37
CYBB-201ENST00000378588 ROBO3Q96MS0 1386 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 SRRM3A6NNA2 597 aaPredicted RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 IGF2BP3O00425 579 aaKnown RBP eCLIP6.49□□□□□ -1.37
CYBB-201ENST00000378588 KIF3CO14782 793 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 MAGEB2O15479 319 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 CFLARO15519 480 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 RIPK2O43353 540 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 GAS2O43903 313 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 RPS12P25398 132 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 RPL21P46778 160 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 DRG2P55039 364 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 GEMIN4P57678 1058 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 ARSHQ5FYA8 562 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 SLC9A9Q8IVB4 645 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 MCOLN2Q8IZK6 566 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 BBS5Q8N3I7 341 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 SCFD2Q8WU76 684 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 LRGUKQ96M69 825 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 BATF3Q9NR55 127 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 PRMT7Q9NVM4 692 aaPredicted RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 FAM198AQ9UFP1 575 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 CHMP2BQ9UQN3 213 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 ASTN1O14525 1302 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 MARF1Q9Y4F3 1742 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 TRAPPC3O43617 180 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 CREB3O43889 395 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 TLR2O60603 784 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 LCA5LO95447 670 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 SNRPAP09012 282 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 KRT10P13645 584 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 PGM1P36871 562 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 EN1Q05925 392 aaPredicted RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 PPP3CAQ08209 521 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 PTK7Q13308 1070 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 KIF22Q14807 665 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 RBBP5Q15291 538 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 SMTNL2Q2TAL5 461 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 GRAMD1BQ3KR37 738 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 BOLA3Q53S33 107 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 TFDP3Q5H9I0 405 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 HGSNATQ68CP4 663 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 PID1Q7Z2X4 250 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 RAB44Q7Z6P3 723 aaPredicted RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 ABRAQ8N0Z2 381 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 PPWD1Q96BP3 646 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 VCPIP1Q96JH7 1222 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 PURBQ96QR8 312 aaKnown RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 NT5C1AQ9BXI3 368 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 FRMD8P1Q9BZ68 369 aaPredicted RBP6.49□□□□□ -1.37
CYBB-201ENST00000378588 NOD2Q9HC29 1040 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 VCX3AQ9NNX9 186 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 PXMP2Q9NR77 195 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 SLC12A6Q9UHW9 1150 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 SNX9Q9Y5X1 595 aa6.49□□□□□ -1.37
CYBB-201ENST00000378588 H3BRJ5 948 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms