RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 DHX40Q8IX18 779 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 AGAP3Q96P47 875 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 CATSPERBQ9H7T0 1116 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 RAVER2Q9HCJ3 691 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 SMARCAL1Q9NZC9 954 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 APPL1Q9UKG1 709 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 FAM47E-STBD1D6RA91 191 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 H2AFYO75367 372 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 CSE1LP55060 971 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 GALNT4Q8N4A0 578 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 DDHD2O94830 711 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 SERPINB9P50453 376 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 RPS6P62753 249 aaKnown RBP13.02□□□□□ -0.32
VPS13A-204ENST00000376634 ZNF200P98182 395 aaPredicted RBP13.02□□□□□ -0.32
VPS13A-204ENST00000376634 ADGRF4Q8IZF3 695 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 HEATR9A2RTY3 570 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 CYP2E1P05181 493 aaPredicted RBP13.02□□□□□ -0.32
VPS13A-204ENST00000376634 CHI3L1P36222 383 aaPredicted RBP13.02□□□□□ -0.32
VPS13A-204ENST00000376634 STX3Q13277 289 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 LRRC8DQ7L1W4 858 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 SPATA18Q8TC71 538 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 ANKS6Q68DC2 871 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 PI16Q6UXB8 463 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 SYBUQ9NX95 663 aa13.02□□□□□ -0.32
VPS13A-204ENST00000376634 AIM2O14862 343 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 RGS5O15539 181 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 MTERF3Q96E29 417 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 MYO5BQ9ULV0 1848 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 KCNK10P57789 538 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 VSNL1P62760 191 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 DSG1Q02413 1049 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 OR6J1Q8NGC5 347 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 OSBP2Q969R2 916 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 AIFM3Q96NN9 605 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 GPR63Q9BZJ6 419 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.33
VPS13A-204ENST00000376634 KBTBD13C9JR72 458 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 HSPA13P48723 471 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 POU4F1Q01851 419 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 PWP1Q13610 501 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 PTK6Q13882 451 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.33
VPS13A-204ENST00000376634 DPP10Q8N608 796 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 BARHL2Q9NY43 387 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 PALLDQ8WX93 1383 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 POLBP06746 335 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 GRK2P25098 689 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 OOSP2Q86WS3 158 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 RIC8BQ9NVN3 520 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 PHF2O75151 1096 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 SEMA3FQ13275 785 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 PDK1Q15118 436 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 MTFR1Q15390 333 aa13.02□□□□□ -0.33
VPS13A-204ENST00000376634 LBHD1Q9BQE6 289 aaPredicted RBP13.02□□□□□ -0.33
VPS13A-204ENST00000376634 CEP170Q5SW79 1584 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 REREQ9P2R6 1566 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 IL18RAPO95256 599 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 WLSQ5T9L3 541 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 RAD18Q9NS91 495 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 ALBP02768 609 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 RCAN1P53805 252 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 BYSLQ13895 437 aaKnown RBP13.01□□□□□ -0.33
VPS13A-204ENST00000376634 LINC00523Q86TU6 105 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 SCFD2Q8WU76 684 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 RBM15Q96T37 977 aaKnown RBP eCLIP13.01□□□□□ -0.33
VPS13A-204ENST00000376634 TIPINQ9BVW5 301 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 SPACA6W5XKT8 324 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 PRIM2P49643 509 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 PTK7Q13308 1070 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 SYCP2LQ5T4T6 812 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 IL31Q6EBC2 164 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 USP15Q9Y4E8 981 aaPredicted RBP13.01□□□□□ -0.33
VPS13A-204ENST00000376634 V9GYQ6 96 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 GPSM2P81274 684 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 RCSD1Q6JBY9 416 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 PPP1R14AQ96A00 147 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 SPAG6O75602 509 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 NPEPPSP55786 919 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 GRM4Q14833 912 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 TXNRD1Q16881 649 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 CCDC149Q6ZUS6 474 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
VPS13A-204ENST00000376634 MTO1Q9Y2Z2 717 aaKnown RBP13.01□□□□□ -0.33
VPS13A-204ENST00000376634 KDM6AO15550 1401 aaPredicted RBP13.01□□□□□ -0.33
VPS13A-204ENST00000376634 EEF2KO00418 725 aaKnown RBP13.01□□□□□ -0.33
VPS13A-204ENST00000376634 MMP10P09238 476 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 CACHD1Q5VU97 1274 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 UGT3A1Q6NUS8 523 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 AHI1Q8N157 1196 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 RAB6BQ9NRW1 208 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 PIM2Q9P1W9 311 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 AP4S1Q9Y587 144 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 PER1O15534 1290 aaPredicted RBP13.01□□□□□ -0.33
VPS13A-204ENST00000376634 CDH16O75309 829 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 ANXA11P50995 505 aaKnown RBP13.01□□□□□ -0.33
VPS13A-204ENST00000376634 CACNB3P54284 484 aa13.01□□□□□ -0.33
VPS13A-204ENST00000376634 CNTN1Q12860 1018 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms