RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 TRIM68Q6AZZ1 485 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 PDIK1LQ8N165 341 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 HPDLQ96IR7 371 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 FGFR1OP2Q9NVK5 253 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 GTF3C4Q9UKN8 822 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 HUNKP57058 714 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 GEN1Q17RS7 908 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 ANKRD20A3Q5VUR7 823 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 TDRD10Q5VZ19 366 aaKnown RBP11.76□□□□□ -0.53
HDAC6-203ENST00000376619 DSTYKQ6XUX3 929 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 C12orf29Q8N999 325 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 P3H4Q92791 437 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 INPP4AQ96PE3 977 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-203ENST00000376619 RAB6BQ9NRW1 208 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 KCND1Q9NSA2 647 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 PCDHGC5Q9Y5F6 944 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 PCDHA2Q9Y5H9 948 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 SCINQ9Y6U3 715 aa11.76□□□□□ -0.53
HDAC6-203ENST00000376619 RBP3P10745 1247 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 BCAR1P56945 870 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 BEX3Q00994 111 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SLMAPQ14BN4 828 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 MDH1BQ5I0G3 518 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SCUBE3Q8IX30 993 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 PORCNQ9H237 461 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 BTBD7Q9P203 1132 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 EIF3HO15372 352 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■□□ 16.8
HDAC6-203ENST00000376619 ATP5DP30049 168 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 EML3Q32P44 896 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SRLQ86TD4 932 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 ADAM32Q8TC27 787 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SPATA18Q8TC71 538 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 KLRG1Q96E93 195 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SENP7Q9BQF6 1050 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 PITPNM3Q9BZ71 974 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SDC4P31431 198 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 NRLP54845 237 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 EIF3EP60228 445 aaKnown RBP11.75□□□□□ -0.53
HDAC6-203ENST00000376619 FMO1Q01740 532 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 BYSLQ13895 437 aaKnown RBP11.75□□□□□ -0.53
HDAC6-203ENST00000376619 MFSD7Q6UXD7 560 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 HIPK4Q8NE63 616 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 ATL2Q8NHH9 583 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 PLEKHO2Q8TD55 490 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 KLHL29Q96CT2 875 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 TRIM11Q96F44 468 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 PPP1R12CQ9BZL4 782 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SMARCAD1Q9H4L7 1026 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.75□□□□□ -0.53
HDAC6-203ENST00000376619 NEU2Q9Y3R4 380 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 URB1O60287 2271 aaKnown RBP11.75□□□□□ -0.53
HDAC6-203ENST00000376619 ADGRA3Q8IWK6 1321 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 KCNN4O15554 427 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 TOM1L1O75674 476 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 STAG3L1P0CL83 205 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 RPS12P25398 132 aaKnown RBP11.75□□□□□ -0.53
HDAC6-203ENST00000376619 ALDH3A1P30838 453 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 OVGP1Q12889 678 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 NAA25Q14CX7 972 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 TAF1CQ15572 869 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-203ENST00000376619 MAP7D3Q8IWC1 876 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 KIAA0319LQ8IZA0 1049 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SIX6OS1Q8N1H7 587 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 ZNF473Q8WTR7 871 aaKnown RBP11.75□□□□□ -0.53
HDAC6-203ENST00000376619 SCFD2Q8WU76 684 aa11.75□□□□□ -0.53
HDAC6-203ENST00000376619 TMEM120BA0PK00 339 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 H3BRB1 525 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 MT-ND3P03897 115 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 SRGAP2BP0DMP2 458 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 RNASELQ05823 741 aaKnown RBP11.74□□□□□ -0.53
HDAC6-203ENST00000376619 CAPSQ13938 189 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 TMEM132DQ14C87 1099 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 C6orf118Q5T5N4 469 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 CATSPERGQ6ZRH7 1159 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 USP33Q8TEY7 942 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 AENQ8WTP8 325 aaKnown RBP11.74□□□□□ -0.53
HDAC6-203ENST00000376619 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 NIF3L1Q9GZT8 377 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 TUT1Q9H6E5 874 aaKnown RBP11.74□□□□□ -0.53
HDAC6-203ENST00000376619 COL4A1P02462 1669 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 ZNF536O15090 1300 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-203ENST00000376619 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 OGTO15294 1046 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 CYP2C9P11712 490 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 KCNA4P22459 653 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 TBXAS1P24557 533 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-203ENST00000376619 AP1B1Q10567 949 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 SGSM1Q2NKQ1 1148 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 CFAP157Q5JU67 520 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 GNASQ5JWF2 1037 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 EPM2AIP1Q7L775 607 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-203ENST00000376619 GPC2Q8N158 579 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 C2orf69Q8N8R5 385 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 FAM167AQ96KS9 214 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 ERAP1Q9NZ08 941 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms