RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MYBP10242 640 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 SCP2P22307 547 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 HSPA9P38646 679 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 KRT17Q04695 432 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 NCOA4Q13772 614 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 TMTC4Q5T4D3 741 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 E4F1Q66K89 784 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 CDH24Q86UP0 819 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 DENND6AQ8IWF6 608 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 FBXO16Q8IX29 292 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 HPS3Q969F9 1004 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 TUBGCP3Q96CW5 907 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 WNT8AQ9H1J5 351 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 PSD3Q9NYI0 1048 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 LSM7Q9UK45 103 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 DSEQ9UL01 958 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 SNRPFP62306 86 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 DCAF4L1Q3SXM0 396 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 SPON2Q9BUD6 331 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 GPR182O15218 404 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 NLRP11P59045 1033 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 DPF2Q92785 391 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 FAM161BQ96MY7 647 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 TRPV6Q9H1D0 765 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 AXIN1O15169 862 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 PLIN5Q00G26 463 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 RAD51Q06609 339 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 KRT72Q14CN4 511 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 ICA1LQ8NDH6 482 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 SH3TC2Q8TF17 1288 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 SEPT5Q99719 369 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 EDEM3Q9BZQ6 932 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 BATF3Q9NR55 127 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 PPME1Q9Y570 386 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 SLC4A7Q9Y6M7 1214 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 MSH4O15457 936 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 DHX35Q9H5Z1 703 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 ZNF229Q9UJW7 825 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 SNX12Q9UMY4 172 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 MYMKA6NI61 221 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 EIF3DO15371 548 aaKnown RBP eCLIP13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 PDXDC1Q6P996 788 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 TNIP2Q8NFZ5 429 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 STAMBPL1Q96FJ0 436 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 MMTAG2Q9BU76 263 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 MLXIPLQ9NP71 852 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 DYRK4Q9NR20 520 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 TRIM16O95361 564 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 SULT1E1P49888 294 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 BFSP2Q13515 415 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 KIF19Q2TAC6 998 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 DCTN4Q9UJW0 460 aa13.97□□□□□ -0.17
RAPGEF1-201ENST00000372189 CYP26A1O43174 497 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 EXTL3O43909 919 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 KRT74Q7RTS7 529 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 FAM8A1Q9UBU6 413 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 LIMA1Q9UHB6 759 aaKnown RBP13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 HORMAD1Q86X24 394 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 RNF25Q96BH1 459 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 AGPAT1Q99943 283 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 LRRC1Q9BTT6 524 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 NKRFO15226 690 aaKnown RBP eCLIP13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 CCDC22O60826 627 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 AP1B1Q10567 949 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 DACT2Q5SW24 774 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 SPATA21Q7Z572 469 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 ADGRA1Q86SQ6 560 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 CATSPER3Q86XQ3 398 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 VPS39Q96JC1 886 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 SPATC1LQ9H0A9 340 aa13.96□□□□□ -0.17
RAPGEF1-201ENST00000372189 KPNA6O60684 536 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 AGTP01019 485 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 DSG3P32926 999 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 PAPOLAP51003 745 aaKnown RBP13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 HERVK_113P62684 666 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 TROAPQ12815 778 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 DPYDQ12882 1025 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 ZNF211Q13398 564 aaPredicted RBP13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 LRRC14Q15048 493 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 TMC5Q6UXY8 1006 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 MAGEB5Q9BZ81 275 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 PXMP2Q9NR77 195 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 ARL2BPQ9Y2Y0 163 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 ITIH6Q6UXX5 1313 aa13.96□□□□□ -0.18
RAPGEF1-201ENST00000372189 PDGFRBP09619 1106 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 BYSLQ13895 437 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 MTF1Q14872 753 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 CCDC137Q6PK04 289 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 KIAA1683Q9H0B3 1180 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 PLEKHA5Q9HAU0 1116 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ETAA1Q9NY74 926 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 COPS2P61201 443 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ZC2HC1CQ53FD0 456 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 HEATR6Q6AI08 1181 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ITPRIPL1Q6GPH6 555 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 RASGRP2Q7LDG7 609 aa13.95□□□□□ -0.18
RAPGEF1-201ENST00000372189 ADCK1Q86TW2 530 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms