RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SLC7A5P2Q9GIP4 190 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 DDIT4Q9NX09 232 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 ORC6Q9Y5N6 252 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 CFAP69A5D8W1 941 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 KIF3CO14782 793 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 SLC2A3P11169 496 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 BHMTQ93088 406 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 ATXN7L3BQ96GX2 97 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 SLC13A1Q9BZW2 595 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 RSAD1Q9HA92 442 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 METTL5Q9NRN9 209 aaKnown RBP15.46■□□□□ 0.07
NDC1-201ENST00000371429 SLC11A2P49281 568 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 SYCP2LQ5T4T6 812 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 ACAD11Q709F0 780 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 MRIQ9BWK5 157 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 TMEM39AQ9NV64 488 aa15.46■□□□□ 0.07
NDC1-201ENST00000371429 APOBEC2Q9Y235 224 aaKnown RBP15.46■□□□□ 0.07
NDC1-201ENST00000371429 CDH18Q13634 790 aa15.46■□□□□ 0.06
NDC1-201ENST00000371429 ACVR2BQ13705 512 aa15.46■□□□□ 0.06
NDC1-201ENST00000371429 MIB1Q86YT6 1006 aa15.46■□□□□ 0.06
NDC1-201ENST00000371429 SPATA4Q8NEY3 305 aa15.46■□□□□ 0.06
NDC1-201ENST00000371429 RMDN2Q96LZ7 410 aa15.46■□□□□ 0.06
NDC1-201ENST00000371429 PPARGC1AQ9UBK2 798 aaKnown RBP15.46■□□□□ 0.06
NDC1-201ENST00000371429 DOLKQ9UPQ8 538 aa15.46■□□□□ 0.06
NDC1-201ENST00000371429 PPP1R3GB7ZBB8 358 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 ALDH2P05091 517 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 EPHB2P29323 1055 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 TM4SF1P30408 202 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 ATICP31939 592 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 IFNA8P32881 189 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 RPL10AP62906 217 aaKnown RBP15.45■□□□□ 0.06
NDC1-201ENST00000371429 DEFB115Q30KQ5 88 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 GJB7Q6PEY0 223 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 FAM47EQ6ZV65 393 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 ATP6V0D2Q8N8Y2 350 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 REPS2Q8NFH8 660 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 FBXO32Q969P5 355 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 A1CFQ9NQ94 594 aaKnown RBP15.45■□□□□ 0.06
NDC1-201ENST00000371429 KIAA1257Q9ULG3 409 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 ATMINO43313 823 aaPredicted RBP15.45■□□□□ 0.06
NDC1-201ENST00000371429 TMEM253P0C7T8 217 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 KCNA4P22459 653 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 ELAVL2Q12926 359 aaKnown RBP15.45■□□□□ 0.06
NDC1-201ENST00000371429 NCAPHQ15003 741 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 FEZF2Q8TBJ5 459 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 HASPINQ8TF76 798 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 OSBPL8Q9BZF1 889 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 FAM198AQ9UFP1 575 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 PCDHB12Q9Y5F1 795 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 IRF6O14896 467 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 MMEP08473 750 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 CYP2W1Q8TAV3 490 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 ARHGEF26Q96DR7 871 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 ZNF212Q9UDV6 495 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 SNX12Q9UMY4 172 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 CCDC78A2IDD5 438 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 GHRP10912 638 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 CASP4P49662 377 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 MFSD10Q14728 455 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 PCSK7Q16549 785 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 GSPT2Q8IYD1 628 aaKnown RBP15.45■□□□□ 0.06
NDC1-201ENST00000371429 ELOA2Q8IYF1 753 aaPredicted RBP15.45■□□□□ 0.06
NDC1-201ENST00000371429 GIPC2Q8TF65 315 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 THOC1Q96FV9 657 aaKnown RBP15.45■□□□□ 0.06
NDC1-201ENST00000371429 SERPINI1Q99574 410 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 TXLNGQ9NUQ3 528 aa15.45■□□□□ 0.06
NDC1-201ENST00000371429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.45■□□□□ 0.06
NDC1-201ENST00000371429 MAP2P11137 1827 aaKnown RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 ANP32DO95626 131 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 EGFRP00533 1210 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 BRAFP15056 766 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 CLNS1AP54105 237 aaKnown RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 CCDC15Q0P6D6 951 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 ORC1Q13415 861 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 FSCN1Q16658 493 aaKnown RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 SMTNL2Q2TAL5 461 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 FAM133BQ5BKY9 247 aaKnown RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 ZNF280DQ6N043 979 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 ADGRF2Q8IZF7 708 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 SPATA18Q8TC71 538 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 RPRD1AQ96P16 312 aaPredicted RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 CENPKQ9BS16 269 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 FAM96AQ9H5X1 160 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 SYNDIG1Q9H7V2 258 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 DSEQ9UL01 958 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 H0Y626 953 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 M0QYT0 321 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 MAPK13O15264 365 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 COMTP21964 271 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 LAMB3Q13751 1172 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 NTRK3Q16288 839 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 PKN1Q16512 942 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 SYTL3Q4VX76 610 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 BOLA3Q53S33 107 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 C15orf52Q6ZUT6 534 aaKnown RBP15.44■□□□□ 0.06
NDC1-201ENST00000371429 RASGRP2Q7LDG7 609 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 ZNF720Q7Z2F6 126 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 SPATA17Q96L03 361 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 USP27XA6NNY8 438 aa15.44■□□□□ 0.06
NDC1-201ENST00000371429 CST8O60676 142 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms