RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PHKA2P46019 1235 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 SLC26A2P50443 739 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 EFNA5P52803 228 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 MYL6P60660 151 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 MYBPC2Q14324 1141 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 ZNF484Q5JVG2 852 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 CD99L2Q8TCZ2 262 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 HELQQ8TDG4 1101 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 TMEM40Q8WWA1 233 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 CCT8L2Q96SF2 557 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 C1orf112Q9NSG2 853 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 KLK14Q9P0G3 267 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 NUB1Q9Y5A7 615 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 ACKR2O00590 384 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 EZRP15311 586 aaKnown RBP11.35□□□□□ -0.59
TPM3-212ENST00000368533 FERP16591 822 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 GALCP54803 685 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 NBPF20Q3BBV1 942 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 C10orf76Q5T2E6 689 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 SLFN12LQ6IEE8 588 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 TMEM270Q6UE05 265 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 FUKQ8N0W3 1084 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 ARHGEF26Q96DR7 871 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 BTBD6Q96KE9 485 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 THAP2Q9H0W7 228 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 DPH5Q9H2P9 285 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 TMEM134Q9H6X4 195 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 CNTNAP2Q9UHC6 1331 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 PGRMC1O00264 195 aaKnown RBP11.34□□□□□ -0.59
TPM3-212ENST00000368533 AKAP5P24588 427 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 GPC3P51654 580 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 FCGRTP55899 365 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 NCOA4Q13772 614 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 PSMD6Q15008 389 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 ODF2Q5BJF6 829 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 CDCA2Q69YH5 1023 aaPredicted RBP11.34□□□□□ -0.59
TPM3-212ENST00000368533 MPZL3Q6UWV2 235 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 CATSPER4Q7RTX7 472 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 TPCN2Q8NHX9 752 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 PCDHB18PQ96TA0 734 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 BAIAP2L1Q9UHR4 511 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 A6NJR5 290 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 OGTO15294 1046 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 SART1O43290 800 aaKnown RBP11.34□□□□□ -0.59
TPM3-212ENST00000368533 C4BPAP04003 597 aaKnown RBP11.34□□□□□ -0.59
TPM3-212ENST00000368533 TMEM191BP0C7N4 346 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 PSEN2P49810 448 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 CDH8P55286 799 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 WDR44Q5JSH3 913 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 THEMIS2Q5TEJ8 643 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 CPNE8Q86YQ8 564 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 UBLCP1Q8WVY7 318 aaPredicted RBP11.34□□□□□ -0.59
TPM3-212ENST00000368533 CTNNBL1Q8WYA6 563 aaPredicted RBP11.34□□□□□ -0.59
TPM3-212ENST00000368533 RUBCNQ92622 972 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 USP6NLQ92738 828 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 EIF2AQ9BY44 585 aaKnown RBP11.34□□□□□ -0.59
TPM3-212ENST00000368533 CACNG4Q9UBN1 327 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 AMACRQ9UHK6 382 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 POLIQ9UNA4 740 aa11.34□□□□□ -0.59
TPM3-212ENST00000368533 NOC2LQ9Y3T9 749 aaKnown RBP11.34□□□□□ -0.59
TPM3-212ENST00000368533 GOLGA6L7A0A1B0GV03 622 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 ABLIM1O14639 778 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 NPTXRO95502 500 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 STAG3L1P0CL83 205 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 ITGA4P13612 1032 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 MFAP3P55082 362 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 NOP14P78316 857 aaKnown RBP11.33□□□□□ -0.6
TPM3-212ENST00000368533 IRX1P78414 480 aaPredicted RBP11.33□□□□□ -0.6
TPM3-212ENST00000368533 MYO1EQ12965 1108 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 GRIK3Q13003 919 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 ZACNQ401N2 412 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 AP1ARQ63HQ0 302 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 SESTD1Q86VW0 696 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 C7orf31Q8N865 590 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 ARMC2Q8NEN0 867 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 CAVIN3Q969G5 261 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 STAMBPL1Q96FJ0 436 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 PBKQ96KB5 322 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 AGPAT1Q99943 283 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 OSBPL7Q9BZF2 842 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 FZD8Q9H461 694 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 PDZD7Q9H5P4 517 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 GDF3Q9NR23 364 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 AMFRQ9UKV5 643 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 PLAAQ9Y263 795 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 L3MBTL1Q9Y468 752 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 PCDHB4Q9Y5E5 795 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 KLHL33A6NCF5 533 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 LACTBL1A8MY62 500 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 FAM189A1O60320 539 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
TPM3-212ENST00000368533 CALRP27797 417 aaKnown RBP11.33□□□□□ -0.6
TPM3-212ENST00000368533 CACNB2Q08289 660 aaPredicted RBP11.33□□□□□ -0.6
TPM3-212ENST00000368533 NFX1Q12986 1120 aaKnown RBP11.33□□□□□ -0.6
TPM3-212ENST00000368533 DAB2IPQ5VWQ8 1189 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 USP37Q86T82 979 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 OR2W6PQ8NHA6 318 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 MYCBPAPQ8TBZ2 947 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
TPM3-212ENST00000368533 CPA5Q8WXQ8 436 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms