RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 M0QZQ0 153 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 HUS1O60921 280 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 ODC1P11926 461 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 ZNF18P17022 549 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 RPL17P18621 184 aaKnown RBP14.92□□□□□ -0.02
TPM3-211ENST00000368531 FGFR3P22607 806 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 ATICP31939 592 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 COPB1P53618 953 aaKnown RBP14.92□□□□□ -0.02
TPM3-211ENST00000368531 NOP14P78316 857 aaKnown RBP14.92□□□□□ -0.02
TPM3-211ENST00000368531 CETN1Q12798 172 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 SMC1AQ14683 1233 aaKnown RBP14.92□□□□□ -0.02
TPM3-211ENST00000368531 WDR44Q5JSH3 913 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 MIIPQ5JXC2 388 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 VARS2Q5ST30 1063 aaKnown RBP14.92□□□□□ -0.02
TPM3-211ENST00000368531 KIAA0319Q5VV43 1072 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 SCARA5Q6ZMJ2 495 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 METTL23Q86XA0 190 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 TATDN2Q93075 761 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 MRPL38Q96DV4 380 aaKnown RBP14.92□□□□□ -0.02
TPM3-211ENST00000368531 CDX2Q99626 313 aaPredicted RBP14.92□□□□□ -0.02
TPM3-211ENST00000368531 CHST7Q9NS84 486 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 LIMA1Q9UHB6 759 aaKnown RBP14.92□□□□□ -0.02
TPM3-211ENST00000368531 HIDE1A8MVS5 230 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 FSCN2O14926 492 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 SYN3O14994 580 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 ASS1P00966 412 aaKnown RBP14.91□□□□□ -0.02
TPM3-211ENST00000368531 PAX3P23760 479 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 RAP1GAPP47736 663 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 CDH8P55286 799 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 ARPP19P56211 112 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 DSG1Q02413 1049 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 YWHAHQ04917 246 aaPredicted RBP14.91□□□□□ -0.02
TPM3-211ENST00000368531 PTPN14Q15678 1187 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 PSMD5Q16401 504 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 SOWAHAQ2M3V2 549 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 ADGRD2Q7Z7M1 963 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 RBM23Q86U06 439 aaKnown RBP14.91□□□□□ -0.02
TPM3-211ENST00000368531 MRPL43Q8N983 215 aaKnown RBP14.91□□□□□ -0.02
TPM3-211ENST00000368531 APPL2Q8NEU8 664 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 SMYD3Q9H7B4 428 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 APOBEC3GQ9HC16 384 aaKnown RBP14.91□□□□□ -0.02
TPM3-211ENST00000368531 NGRNQ9NPE2 291 aaKnown RBP14.91□□□□□ -0.02
TPM3-211ENST00000368531 GDAP2Q9NXN4 497 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 COQ4Q9Y3A0 265 aa14.91□□□□□ -0.02
TPM3-211ENST00000368531 RANBP2P49792 3224 aaKnown RBP14.91□□□□□ -0.02
TPM3-211ENST00000368531 ARHGEF37A1IGU5 675 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 C2orf71A6NGG8 1288 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 PER2O15055 1255 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 P4HA2O15460 535 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 STAU1O95793 577 aaKnown RBP14.9□□□□□ -0.02
TPM3-211ENST00000368531 SERPINC1P01008 464 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 WEE2P0C1S8 567 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 SLC9A1P19634 815 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 CDR1P51861 262 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 CTXN3Q4LDR2 81 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 OVOS1Q6IE37 1185 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 PDE12Q6L8Q7 609 aaKnown RBP14.9□□□□□ -0.02
TPM3-211ENST00000368531 GBP6Q6ZN66 633 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 GAS2L3Q86XJ1 694 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 ADGRF2Q8IZF7 708 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 PDCL2Q8N4E4 241 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 EHBP1Q8NDI1 1231 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 LNX1Q8TBB1 728 aaPredicted RBP14.9□□□□□ -0.02
TPM3-211ENST00000368531 TAF4BQ92750 862 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 GUCD1Q96NT3 240 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 MRPL45Q9BRJ2 306 aaKnown RBP14.9□□□□□ -0.02
TPM3-211ENST00000368531 ANP32EQ9BTT0 268 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 INTS2Q9H0H0 1204 aaKnown RBP14.9□□□□□ -0.02
TPM3-211ENST00000368531 SDCBP2Q9H190 292 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 IGFLR1Q9H665 355 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 MTMR10Q9NXD2 777 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 GCNT4Q9P109 453 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 STK39Q9UEW8 545 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 DSEQ9UL01 958 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 L1RE1Q9UN81 338 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 SSX2IPQ9Y2D8 614 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 MTCH2Q9Y6C9 303 aa14.9□□□□□ -0.02
TPM3-211ENST00000368531 PLXNA3P51805 1871 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 H7C4K7 107 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 ADAM12O43184 909 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 HCRTO43612 131 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 CNPP09543 421 aaKnown RBP14.89□□□□□ -0.03
TPM3-211ENST00000368531 P4HA1P13674 534 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 TYMPP19971 482 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 APBA1Q02410 837 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 CCDC85BQ15834 202 aaPredicted RBP14.89□□□□□ -0.03
TPM3-211ENST00000368531 FKBP15Q5T1M5 1219 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 ANKS3Q6ZW76 656 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 OSTM1Q86WC4 334 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 TOP6BLQ8N6T0 577 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 OR6B3Q8NGW1 331 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 LMO3Q8TAP4 145 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 PPM1EQ8WY54 764 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 PIK3R5Q8WYR1 880 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 NT5C1BQ96P26 610 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 RBSNQ9H1K0 784 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 SNX25Q9H3E2 840 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 TLE6Q9H808 572 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 VRTNQ9H8Y1 702 aa14.89□□□□□ -0.03
TPM3-211ENST00000368531 MYO7AQ13402 2215 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms