RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 TTC38Q5R3I4 469 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 TEX35Q5T0J7 233 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 CDKAL1Q5VV42 579 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 TRIM65Q6PJ69 517 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 FOXR2Q6PJQ5 311 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 SYT10Q6XYQ8 523 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 MCATQ8IVS2 390 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 REXO1L1PQ8IX06 675 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 TMEM192Q8IY95 271 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 ZNF713Q8N859 430 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 CEP112Q8N8E3 955 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 ENAHQ8N8S7 591 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 MFSD2AQ8NA29 543 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 DTWD2Q8NBA8 298 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 DAGLBQ8NCG7 672 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 VN1R2Q8NFZ6 395 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 DHX38Q92620 1227 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 RABGGTAQ92696 567 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 SEC16BQ96JE7 1060 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 AK8Q96MA6 479 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 FOXQ1Q9C009 403 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 SEMA4AQ9H3S1 761 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 EHMT1Q9H9B1 1298 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 CABP5Q9NP86 173 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 PARD6AQ9NPB6 346 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 GINM1Q9NU53 330 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 TRMT1Q9NXH9 659 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 HOXC10Q9NYD6 342 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 LIMA1Q9UHB6 759 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 RWDD2AQ9UIY3 292 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 CDH22Q9UJ99 828 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 ZNF214Q9UL59 606 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 BARX2Q9UMQ3 279 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 PPP2R2CQ9Y2T4 447 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 RIPK3Q9Y572 518 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 PCDHB14Q9Y5E9 798 aa7.13□□□□□ -1.27
ECHDC1-202ENST00000368289 TRIP12Q14669 1992 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 A0A1W2PQC6 194 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 USP27XA6NNY8 438 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 SLC26A4O43511 780 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 CABYRO75952 493 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 HTR3BO95264 441 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 BAG3O95817 575 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 SCG2P13521 617 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 ATP1A3P13637 1013 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 AOC1P19801 751 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 MCM3P25205 808 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 EEF1GP26641 437 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 NTF4P34130 210 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 YARSP54577 528 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 SHC2P98077 582 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 GPS2Q13227 327 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 CUL4BQ13620 913 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 BRD3Q15059 726 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 COBLL1Q53SF7 1204 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 RRP12Q5JTH9 1297 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 ZNF658Q5TYW1 1059 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 TMCO3Q6UWJ1 677 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 SEZ6L2Q6UXD5 910 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 GK5Q6ZS86 529 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 RASGRP2Q7LDG7 609 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 RIOX2Q8IUF8 465 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 TMEM139Q8IV31 216 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 FAM114A1Q8IWE2 563 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 MRPL41Q8IXM3 137 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 TC2NQ8N9U0 490 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 HNRNPLLQ8WVV9 542 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 NSUN4Q96CB9 384 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 PAGE5Q96GU1 130 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 AIFM3Q96NN9 605 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 CLIC6Q96NY7 704 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 NUP58Q9BVL2 599 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 CCSER1Q9C0I3 900 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 LRRC27Q9C0I9 530 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 GBP3Q9H0R5 595 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 CSRNP2Q9H175 543 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 PDGFCQ9NRA1 345 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 FBXO28Q9NVF7 368 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 REV1Q9UBZ9 1251 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 ADD3Q9UEY8 706 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 POLR3KQ9Y2Y1 108 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 INSL6Q9Y581 213 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 PCDHB6Q9Y5E3 794 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 TANC1Q9C0D5 1861 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 COL11A1P12107 1806 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 ITPR3Q14573 2671 aa7.12□□□□□ -1.27
ECHDC1-202ENST00000368289 DOPEY1Q5JWR5 2465 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 MYH1P12882 1939 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 DYNC1LI2O43237 492 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 KIF5CO60282 957 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 ERLIN1O75477 346 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 FSTP19883 344 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 SP100P23497 879 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 PBX1P40424 430 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 USP14P54578 494 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 NLRP5P59047 1200 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 CBX1P83916 185 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 AMPD3Q01432 767 aa7.11□□□□□ -1.27
ECHDC1-202ENST00000368289 CPSF6Q16630 551 aaKnown RBP eCLIP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms