RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 WWP1Q9H0M0 922 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 MYLK2Q9H1R3 596 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 KIAA1586Q9HCI6 787 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 ZC3H7BQ9UGR2 993 aaKnown RBP14.62□□□□□ -0.07
COL6A1-201ENST00000361866 TLK1Q9UKI8 766 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 ASTN1O14525 1302 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 TCRBV7S2A1N4TA0A589 114 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 PIK3C2AO00443 1686 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 GNAT1P11488 350 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 CREB1P16220 341 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 ARL4AP40617 200 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 ZNF200P98182 395 aaPredicted RBP14.62□□□□□ -0.07
COL6A1-201ENST00000361866 CUL3Q13618 768 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 BAATQ14032 418 aaPredicted RBP14.62□□□□□ -0.07
COL6A1-201ENST00000361866 RRP1BQ14684 758 aaKnown RBP14.62□□□□□ -0.07
COL6A1-201ENST00000361866 FEZF2Q8TBJ5 459 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 ARMCX1Q9P291 453 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 FAM208AQ9UK61 1670 aaKnown RBP14.62□□□□□ -0.07
COL6A1-201ENST00000361866 TRIM49D1C9J1S8 452 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 TBXAS1P24557 533 aaPredicted RBP14.62□□□□□ -0.07
COL6A1-201ENST00000361866 HIC1Q14526 733 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 TRIP10Q15642 601 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 MAPK6Q16659 721 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 C11orf63Q6NUN7 778 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 TRIM72Q6ZMU5 477 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 CCT6BQ92526 530 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 RPF1Q9H9Y2 349 aaKnown RBP14.62□□□□□ -0.07
COL6A1-201ENST00000361866 ENTPD5O75356 428 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 TYK2P29597 1187 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 ZNF568Q3ZCX4 644 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 GPAT2Q6NUI2 795 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 SLC25A41Q8N5S1 370 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 MED10Q9BTT4 135 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 FEM1BQ9UK73 627 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 TBX20Q9UMR3 447 aa14.62□□□□□ -0.07
COL6A1-201ENST00000361866 BCL9O00512 1426 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 RICTORQ6R327 1708 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 XRN1Q8IZH2 1706 aaKnown RBP14.61□□□□□ -0.07
COL6A1-201ENST00000361866 O00370 1275 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 MYL2P10916 166 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 VHLP40337 213 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 RGS7P49802 495 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 GEMIN4P57678 1058 aaKnown RBP14.61□□□□□ -0.07
COL6A1-201ENST00000361866 PPP1R2P3Q6NXS1 205 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 LLGL2Q6P1M3 1020 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 ISLR2Q6UXK2 745 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 NDUFAF2Q8N183 169 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 LRRC15Q8TF66 581 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 CCDC97Q96F63 343 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-201ENST00000361866 MASTLQ96GX5 879 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 CDHR1Q96JP9 859 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 ZNF408Q9H9D4 720 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 SPATA31A6Q5VVP1 1343 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 IGSF9BQ9UPX0 1349 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 NEMP1O14524 444 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 FGRP09769 529 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 PECAM1P16284 738 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-201ENST00000361866 DHX35Q9H5Z1 703 aaKnown RBP14.61□□□□□ -0.07
COL6A1-201ENST00000361866 GCLCP48506 637 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-201ENST00000361866 SHROOM1Q2M3G4 852 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-201ENST00000361866 PRPF39Q86UA1 669 aaKnown RBP14.61□□□□□ -0.07
COL6A1-201ENST00000361866 RNF168Q8IYW5 571 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-201ENST00000361866 AFAP1L2Q8N4X5 818 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 CCNYL1Q8N7R7 359 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 FBXO36Q8NEA4 188 aa14.61□□□□□ -0.07
COL6A1-201ENST00000361866 BTKQ06187 659 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 CHI3L2Q15782 390 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 FAM160B1Q5W0V3 765 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 OTOP1Q7RTM1 612 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 EIF1ADQ8N9N8 165 aaKnown RBP14.6□□□□□ -0.07
COL6A1-201ENST00000361866 EPS8L1Q8TE68 723 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 KCND2Q9NZV8 630 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 SPATA31A5Q5VU36 1347 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 SPATA31A7Q8IWB4 1347 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 P4HA2O15460 535 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 DNAJC6O75061 913 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 GMNNO75496 209 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 LCA5LO95447 670 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 ADRA1DP25100 572 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 SFNP31947 248 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 CENPCQ03188 943 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 MED21Q13503 144 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 ATP13A4Q4VNC1 1196 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 DCLRE1BQ9H816 532 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 ASNSD1Q9NWL6 643 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 SAE1Q9UBE0 346 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-201ENST00000361866 STRIP2Q9ULQ0 834 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 PCDHA3Q9Y5H8 950 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-201ENST00000361866 RBAK-RBAKDNI3L0D1 243 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 GIPC1O14908 333 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 TGFB1I1O43294 461 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 ETS1P14921 441 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 NPTX2P47972 431 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 ITKQ08881 620 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 STX3Q13277 289 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 CYTH1Q15438 398 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 RSPH3Q86UC2 560 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 OR6B3Q8NGW1 331 aa14.6□□□□□ -0.07
COL6A1-201ENST00000361866 AGAP3Q96P47 875 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms