RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 RAPGEF5Q92565 580 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 PGM2Q96G03 612 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 SNF8Q96H20 258 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 MMP19Q99542 508 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 SELENOSQ9BQE4 189 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 INO80BQ9C086 356 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-201ENST00000357783 AAASQ9NRG9 546 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 RBPJLQ9UBG7 517 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 GMNCA6NCL1 334 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 PI4K2BG5E9Z4 385 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 TRAPPC3O43617 180 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 TMEM191BP0C7N4 346 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 TCF4P15884 667 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 MAGEA9P43362 315 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 GRM1Q13255 1194 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 KCTD2Q14681 263 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 ATP13A4Q4VNC1 1196 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 GRK7Q8WTQ7 553 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 CDC42EP4Q9H3Q1 356 aaKnown RBP16.81■□□□□ 0.28
PHTF1-201ENST00000357783 AGTPBP1Q9UPW5 1226 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 PPME1Q9Y570 386 aa16.81■□□□□ 0.28
PHTF1-201ENST00000357783 IGKV6-21A0A0C4DH24 114 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 SRRM3A6NNA2 597 aaPredicted RBP16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ACSL3O95573 720 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 HOXC6P09630 235 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ATF2P15336 505 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ADCY8P40145 1251 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 CLCN3P51790 818 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ITGA8P53708 1063 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ADCY2Q08462 1091 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ZNF699Q32M78 642 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 GPAT2Q6NUI2 795 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 MCEEQ96PE7 176 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 FAM129AQ9BZQ8 928 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 C2orf40Q9H1Z8 148 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 IP6K2Q9UHH9 426 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 GAS2O43903 313 aaKnown RBP16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ITIH2P19823 946 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 IVDP26440 423 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 SGSM1Q2NKQ1 1148 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ATF7IP2Q5U623 682 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 EEF1DP3Q658K8 133 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 KAZNQ674X7 775 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 PPP1R2P3Q6NXS1 205 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 RHBDF2Q6PJF5 856 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 MPZL3Q6UWV2 235 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.8■□□□□ 0.28
PHTF1-201ENST00000357783 PLPPR4Q7Z2D5 763 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ATL2Q8NHH9 583 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 SCLT1Q96NL6 688 aa16.8■□□□□ 0.28
PHTF1-201ENST00000357783 CNOT10Q9H9A5 744 aaKnown RBP16.8■□□□□ 0.28
PHTF1-201ENST00000357783 ANK1P16157 1881 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 CXCL11O14625 94 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 CDR1P51861 262 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 C6orf118Q5T5N4 469 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 DNAJC24Q6P3W2 148 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 SYDE1Q6ZW31 735 aaPredicted RBP16.79■□□□□ 0.28
PHTF1-201ENST00000357783 ANKRD13AQ8IZ07 590 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 EXD1Q8NHP7 514 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 TFAP2BQ92481 460 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 PDGFCQ9NRA1 345 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 SPDYE5A6NIY4 337 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 RASGRF2O14827 1237 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 CALB1P05937 261 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 PAEPP09466 180 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 TXNP10599 105 aaKnown RBP16.79■□□□□ 0.28
PHTF1-201ENST00000357783 DCUN1D2Q6PH85 259 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 TRMT10CQ7L0Y3 403 aaKnown RBP16.79■□□□□ 0.28
PHTF1-201ENST00000357783 PWWP2AQ96N64 755 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 NXF1Q9UBU9 619 aaKnown RBP16.79■□□□□ 0.28
PHTF1-201ENST00000357783 POLIQ9UNA4 740 aa16.79■□□□□ 0.28
PHTF1-201ENST00000357783 TMEM191CA6NGB0 347 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 ACKR2O00590 384 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 TNNC2P02585 160 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 KRT10P13645 584 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 LIG3P49916 1009 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 IGBP1P78318 339 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 ZNF252P-AS1Q0IIN9 211 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 SURF1Q15526 300 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 QPCTQ16769 361 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 CYP4A22Q5TCH4 519 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 EFCAB12Q6NXP0 572 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 TSHZ1Q6ZSZ6 1077 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 ZNF365Q70YC5 407 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 PRUNE1Q86TP1 453 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 TMEM192Q8IY95 271 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 TMEM130Q8N3G9 435 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 TMEM35BQ8NCS4 154 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 MINDY3Q9H8M7 445 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 RNF181Q9P0P0 153 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 ANAPC5Q9UJX4 755 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 DNAJC25-GNG10A0A024R161 153 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 F8VP50 259 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 KIAA0754O94854 1291 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 LSM8O95777 96 aaKnown RBP16.78■□□□□ 0.28
PHTF1-201ENST00000357783 KRT1P04264 644 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 KRT19P08727 400 aa16.78■□□□□ 0.28
PHTF1-201ENST00000357783 CXCL8P10145 99 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms