RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 NRKQ7Z2Y5 1582 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 METP08581 1390 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 GNB5O14775 395 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 USP11P51784 963 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 NAB2Q15742 525 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 ZFP42Q96MM3 310 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 BBS2Q9BXC9 721 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 MYLK2Q9H1R3 596 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 VPS54Q9P1Q0 977 aa8.38□□□□□ -1.07
HTT-201ENST00000355072 RNMTO43148 476 aaKnown RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 USP1O94782 785 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PSAPP07602 524 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 MYL2P10916 166 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 HNRNPH1P31943 449 aaKnown RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 CHRNB3Q05901 458 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 IP6K1Q92551 441 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 DDHD2O94830 711 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 TCF3P15923 654 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 KRT17Q04695 432 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 FGD2Q7Z6J4 655 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 RNASE11Q8TAA1 199 aaKnown RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 SMYD3Q9H7B4 428 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 SNAP23O00161 211 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 HPCAP84074 193 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 DDR2Q16832 855 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 TYSND1Q2T9J0 566 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 ING4Q9UNL4 249 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PLAGL2Q9UPG8 496 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 CCND2P30279 289 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 HDLBPQ00341 1268 aaKnown RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 FAM98BQ52LJ0 330 aaKnown RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 C17orf75Q9HAS0 396 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 FAM92AA1XBS5 289 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 FGAP02671 866 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 NR4A1P22736 598 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 S100GP29377 79 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 RAB2AP61019 212 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 GPS1Q13098 491 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 EFHC2Q5JST6 749 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 CYP4Z1Q86W10 505 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 ERP27Q96DN0 273 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 NOL6Q9H6R4 1146 aaKnown RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 KIAA1024Q9UPX6 916 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 SHOC2Q9UQ13 582 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PGM3O95394 542 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 MOCS3O95396 460 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PIK3CGP48736 1102 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PLS1Q14651 629 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 TRIQKQ629K1 86 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 CCDC149Q6ZUS6 474 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 SERTAD1Q9UHV2 236 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 IRGMA1A4Y4 181 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 KRT19P08727 400 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PDGFRBP09619 1106 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 AGAP9Q5VTM2 703 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 TAF5LO75529 589 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 CHN1P15882 459 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 GJA10Q969M2 543 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 C2orf40Q9H1Z8 148 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PLGRKTQ9HBL7 147 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PAK5Q9P286 719 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 R3HDM2Q9Y2K5 976 aaKnown RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 PALLDQ8WX93 1383 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 CLUHO75153 1309 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 FAM200BP0CF97 657 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 MAGEA10P43363 369 aaPredicted RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 ADCY1Q08828 1119 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 FAM102BQ5T8I3 360 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 CLHC1Q8NHS4 586 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 MMS19Q96T76 1030 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 IDH3BO43837 385 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 KRT34O76011 436 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PIK3CBP42338 1070 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 MAPK9P45984 424 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 NECTIN1Q15223 517 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 SAMD4BQ5PRF9 694 aaKnown RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 NME9Q86XW9 330 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 DIS3LQ8TF46 1054 aaKnown RBP8.37□□□□□ -1.07
HTT-201ENST00000355072 ATPIF1Q9UII2 106 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 AURKCQ9UQB9 309 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 OVOS2A0A0J9YW53 1432 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 OVOS2Q6IE36 1432 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 F8VZ95 297 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 C21orf59P57076 290 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 APEX2Q9UBZ4 518 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 DSEQ9UL01 958 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 PCDHA1Q9Y5I3 950 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 AK5Q9Y6K8 562 aa8.37□□□□□ -1.07
HTT-201ENST00000355072 ABCA6Q8N139 1617 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 ZNF862O60290 1169 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 TOP3AQ13472 1001 aaPredicted RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 KBTBD8Q8NFY9 601 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 SRPK1Q96SB4 655 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 MROH7Q68CQ1 1323 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 ATP6V1G2O95670 118 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 VAV1P15498 845 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 SDC4P31431 198 aa8.36□□□□□ -1.07
HTT-201ENST00000355072 EIF2B2P49770 351 aaKnown RBP8.36□□□□□ -1.07
HTT-201ENST00000355072 SKP1P63208 163 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms