RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TMC8Q8IU68 726 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 APPL2Q8NEU8 664 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 BPIFB1Q8TDL5 484 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 OXER1Q8TDS5 423 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 CCDC113Q9H0I3 377 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 SLC38A7Q9NVC3 462 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 THG1LQ9NWX6 298 aaKnown RBP17.35■□□□□ 0.37
DDX55-202ENST00000354291 TPCN1Q9ULQ1 816 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 STK36Q9NRP7 1315 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 RNF40O75150 1001 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 ZIC2O95409 532 aaPredicted RBP17.34■□□□□ 0.37
DDX55-202ENST00000354291 MCM4P33991 863 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 ALDH1A3P47895 512 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 PLCB2Q00722 1185 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 DUSP4Q13115 394 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 C19orf48Q6RUI8 117 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 APBB1IPQ7Z5R6 666 aaPredicted RBP17.34■□□□□ 0.37
DDX55-202ENST00000354291 CEP120Q8N960 986 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 WASF1Q92558 559 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 DDX12PQ92771 950 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 C18orf25Q96B23 403 aaPredicted RBP17.34■□□□□ 0.37
DDX55-202ENST00000354291 ZMAT2Q96NC0 199 aaKnown RBP17.34■□□□□ 0.37
DDX55-202ENST00000354291 KIFC3Q9BVG8 833 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 CCDC94Q9BW85 323 aaPredicted RBP17.34■□□□□ 0.37
DDX55-202ENST00000354291 TTC12Q9H892 705 aaPredicted RBP17.34■□□□□ 0.37
DDX55-202ENST00000354291 POLD4Q9HCU8 107 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 TOPORSQ9NS56 1045 aaPredicted RBP17.34■□□□□ 0.37
DDX55-202ENST00000354291 GKN1Q9NS71 199 aa17.34■□□□□ 0.37
DDX55-202ENST00000354291 SMG1Q96Q15 3661 aaKnown RBP17.33■□□□□ 0.37
DDX55-202ENST00000354291 CDX4O14627 284 aaPredicted RBP17.33■□□□□ 0.36
DDX55-202ENST00000354291 EGFP01133 1207 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 OR4Q2P0C623 313 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
DDX55-202ENST00000354291 TXKP42681 527 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 PLD1Q13393 1074 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 CALCRLQ16602 461 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 ARHGAP15Q53QZ3 475 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 TMEM196Q5HYL7 178 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 EARS2Q5JPH6 523 aaKnown RBP17.33■□□□□ 0.36
DDX55-202ENST00000354291 ALKAL1Q6UXT8 129 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 GAREM2Q75VX8 874 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 SUSD3Q96L08 255 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 TBC1D32Q96NH3 1257 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 MKNK1Q9BUB5 465 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 DNAJC25Q9H1X3 360 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 GJB4Q9NTQ9 266 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 OBP2AQ9NY56 170 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 KLK13Q9UKR3 277 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 SLC27A5Q9Y2P5 690 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 NEUROG3Q9Y4Z2 214 aa17.33■□□□□ 0.36
DDX55-202ENST00000354291 TRIP11Q15643 1979 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 PATE3B3GLJ2 98 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 PRAMEF12O95522 483 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 GABRR2P28476 465 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 NAMPTP43490 491 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 IRX4P78413 519 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 KARSQ15046 597 aaKnown RBP17.32■□□□□ 0.36
DDX55-202ENST00000354291 DNAJB7Q7Z6W7 309 aaPredicted RBP17.32■□□□□ 0.36
DDX55-202ENST00000354291 SMG9Q9H0W8 520 aaKnown RBP17.32■□□□□ 0.36
DDX55-202ENST00000354291 CRISPLD1Q9H336 500 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 ORC3Q9UBD5 711 aaPredicted RBP17.32■□□□□ 0.36
DDX55-202ENST00000354291 MSRB2Q9Y3D2 182 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 TIMM13Q9Y5L4 95 aaPredicted RBP17.32■□□□□ 0.36
DDX55-202ENST00000354291 CACNA1EQ15878 2313 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 ABCA7Q8IZY2 2146 aa17.32■□□□□ 0.36
DDX55-202ENST00000354291 FAM205CA6NFA0 338 aa17.31■□□□□ 0.36
DDX55-202ENST00000354291 TRDMT1O14717 391 aaKnown RBP17.31■□□□□ 0.36
DDX55-202ENST00000354291 VNN2O95498 520 aa17.31■□□□□ 0.36
DDX55-202ENST00000354291 GRM5P41594 1212 aa17.31■□□□□ 0.36
DDX55-202ENST00000354291 DGKEP52429 567 aa17.31■□□□□ 0.36
DDX55-202ENST00000354291 SOWAHCQ53LP3 525 aaPredicted RBP17.31■□□□□ 0.36
DDX55-202ENST00000354291 XKR4Q5GH76 650 aa17.31■□□□□ 0.36
DDX55-202ENST00000354291 EBF3Q9H4W6 596 aa17.31■□□□□ 0.36
DDX55-202ENST00000354291 SLC32A1Q9H598 525 aa17.31■□□□□ 0.36
DDX55-202ENST00000354291 FBRSL1Q9HCM7 1045 aaKnown RBP17.31■□□□□ 0.36
DDX55-202ENST00000354291 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
DDX55-202ENST00000354291 MEFVO15553 781 aaPredicted RBP17.3■□□□□ 0.36
DDX55-202ENST00000354291 SOAT2O75908 522 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 CTDNEP1O95476 244 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 SEC24BO95487 1268 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 APBB3O95704 486 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 U2AF2P26368 475 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDX55-202ENST00000354291 MCM2P49736 904 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 GALK1P51570 392 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 EFNA5P52803 228 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 CYP4F8P98187 520 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 YWHAHQ04917 246 aaPredicted RBP17.3■□□□□ 0.36
DDX55-202ENST00000354291 RUNX3Q13761 415 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 TRIM68Q6AZZ1 485 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 PADI6Q6TGC4 694 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 CYP2U1Q7Z449 544 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 BEST2Q8NFU1 509 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 RPLP0P6Q8NHW5 317 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 IFT74Q96LB3 600 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 ACAP3Q96P50 834 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 NACC1Q96RE7 527 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 TASP1Q9H6P5 420 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 TNFSF13BQ9Y275 285 aa17.3■□□□□ 0.36
DDX55-202ENST00000354291 ASCC3Q8N3C0 2202 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms