RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 CCNG2Q16589 344 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 MUM1Q2TAK8 710 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 ANKMY2Q8IV38 441 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 TEX9Q8N6V9 391 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 FBXL13Q8NEE6 735 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 DNAJC9Q8WXX5 260 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 DNPEPQ9ULA0 475 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 UNGP13051 313 aaPredicted RBP23.66■■□□□ 1.38
TRIM28-202ENST00000341753 EFTUD2Q15029 972 aaKnown RBP eCLIP23.66■■□□□ 1.383e-14■■■■■ 79.4
TRIM28-202ENST00000341753 MAPK6Q16659 721 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 C11orf91Q3C1V1 193 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 TMEM154Q6P9G4 183 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 ZBED8Q8IZ13 594 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 TAB3Q8N5C8 712 aaPredicted RBP23.66■■□□□ 1.38
TRIM28-202ENST00000341753 UCMAQ8WVF2 138 aa23.66■■□□□ 1.38
TRIM28-202ENST00000341753 METTL5Q9NRN9 209 aaKnown RBP23.66■■□□□ 1.38
TRIM28-202ENST00000341753 GOLGA8RI6L899 631 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 NFIBO00712 420 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 VIL1P09327 827 aaKnown RBP23.65■■□□□ 1.38
TRIM28-202ENST00000341753 TCF4P15884 667 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 SPDYE2Q495Y8 402 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 FAM102BQ5T8I3 360 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 SV2AQ7L0J3 742 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 ACSF2Q96CM8 615 aaPredicted RBP23.65■■□□□ 1.38
TRIM28-202ENST00000341753 KLF6Q99612 283 aaPredicted RBP23.65■■□□□ 1.38
TRIM28-202ENST00000341753 ZNF148Q9UQR1 794 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 UMODL1Q5DID0 1318 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 SMIM24O75264 130 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 ATF7P17544 494 aaPredicted RBP23.65■■□□□ 1.38
TRIM28-202ENST00000341753 GPS1Q13098 491 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 B3GNT9Q6UX72 402 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 DSTYKQ6XUX3 929 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 C12orf56Q8IXR9 622 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 TTLL6Q8N841 843 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 RFWD2Q8NHY2 731 aa23.65■■□□□ 1.38
TRIM28-202ENST00000341753 ZNF75CPQ92670 426 aaPredicted RBP23.65■■□□□ 1.38
TRIM28-202ENST00000341753 RBBP6Q7Z6E9 1792 aaKnown RBP23.64■■□□□ 1.38
TRIM28-202ENST00000341753 PRPF4O43172 522 aaKnown RBP eCLIP23.64■■□□□ 1.381e-9■■■□□ 18.4
TRIM28-202ENST00000341753 POTEJP0CG39 1038 aa23.64■■□□□ 1.38
TRIM28-202ENST00000341753 ARSEP51690 589 aa23.64■■□□□ 1.38
TRIM28-202ENST00000341753 SOX10P56693 466 aa23.64■■□□□ 1.38
TRIM28-202ENST00000341753 PLA2G4FQ68DD2 849 aa23.64■■□□□ 1.38
TRIM28-202ENST00000341753 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.64■■□□□ 1.382e-7■■■■■ 70.3
TRIM28-202ENST00000341753 BBOF1Q8ND07 529 aa23.64■■□□□ 1.38
TRIM28-202ENST00000341753 TMEM8AQ9HCN3 771 aa23.64■■□□□ 1.38
TRIM28-202ENST00000341753 PROSCO94903 275 aa23.64■■□□□ 1.37
TRIM28-202ENST00000341753 DPEP1P16444 411 aa23.64■■□□□ 1.37
TRIM28-202ENST00000341753 KRT4P19013 534 aa23.64■■□□□ 1.37
TRIM28-202ENST00000341753 ADRA1DP25100 572 aa23.64■■□□□ 1.37
TRIM28-202ENST00000341753 CALRP27797 417 aaKnown RBP23.64■■□□□ 1.37
TRIM28-202ENST00000341753 NSFP46459 744 aaKnown RBP23.64■■□□□ 1.37
TRIM28-202ENST00000341753 GPC3P51654 580 aa23.64■■□□□ 1.37
TRIM28-202ENST00000341753 GTF2BQ00403 316 aa23.64■■□□□ 1.37
TRIM28-202ENST00000341753 SPP2Q13103 211 aa23.64■■□□□ 1.37
TRIM28-202ENST00000341753 ENDOVQ8N8Q3 282 aaKnown RBP23.64■■□□□ 1.37
TRIM28-202ENST00000341753 ZNF341Q9BYN7 854 aa23.64■■□□□ 1.37
TRIM28-202ENST00000341753 MYPNQ86TC9 1320 aa23.64■■□□□ 1.37
TRIM28-202ENST00000341753 LRRD1A4D1F6 860 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 EGFRP00533 1210 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 HMGB2P26583 209 aaKnown RBP23.63■■□□□ 1.37
TRIM28-202ENST00000341753 UGCGQ16739 394 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 ZNF772Q68DY9 489 aaPredicted RBP23.63■■□□□ 1.37
TRIM28-202ENST00000341753 RIBC1Q8N443 379 aaPredicted RBP23.63■■□□□ 1.37
TRIM28-202ENST00000341753 CHURC1Q8WUH1 139 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 PRR11Q96HE9 360 aaPredicted RBP23.63■■□□□ 1.37
TRIM28-202ENST00000341753 NMRK1Q9NWW6 199 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 AP1G2O75843 785 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 ABHD2P08910 425 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 MUTP22033 750 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 RXRBP28702 533 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 CAP2P40123 477 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 SLC1A1P43005 524 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 GAD2Q05329 585 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 CCDC6Q16204 474 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 TSC22D3Q99576 134 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 KCNH7Q9NS40 1196 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 DLGAP2Q9P1A6 1054 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 USP20Q9Y2K6 914 aa23.63■■□□□ 1.37
TRIM28-202ENST00000341753 A0A0G2JND7 137 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 CFAP69A5D8W1 941 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 GNAT1P11488 350 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 MARK3P27448 753 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 PTPN4P29074 926 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 CNGA1P29973 690 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 RFC5P40937 340 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 PIK3CAP42336 1068 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 PSMC4P43686 418 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 TSNAXIP1Q2TAA8 658 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 WASHC2DQ5SRD0 308 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 CLNKQ7Z7G1 428 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 RHOT1Q8IXI2 618 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 SH3GL3Q99963 347 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 STK32BQ9NY57 414 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 CCPG1Q9ULG6 757 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 MRPL11Q9Y3B7 192 aaKnown RBP23.62■■□□□ 1.37
TRIM28-202ENST00000341753 DSG3P32926 999 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 RASSF2P50749 326 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 SPOPLQ6IQ16 392 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 RELL1Q8IUW5 271 aa23.62■■□□□ 1.37
TRIM28-202ENST00000341753 CADM1Q9BY67 442 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms