RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 DPCR1Q3MIW9 517 aa17.86■□□□□ 0.45
CDK11B-201ENST00000340677 RSBN1LQ6PCB5 846 aaPredicted RBP17.86■□□□□ 0.45
CDK11B-201ENST00000340677 ZNF444Q8N0Y2 327 aaPredicted RBP17.86■□□□□ 0.45
CDK11B-201ENST00000340677 MDM1Q8TC05 714 aa17.86■□□□□ 0.45
CDK11B-201ENST00000340677 AIFM3Q96NN9 605 aa17.86■□□□□ 0.45
CDK11B-201ENST00000340677 PHF12Q96QT6 1004 aa17.86■□□□□ 0.45
CDK11B-201ENST00000340677 GMLQ99445 158 aa17.86■□□□□ 0.45
CDK11B-201ENST00000340677 COQ7Q99807 217 aa17.86■□□□□ 0.45
CDK11B-201ENST00000340677 SDF4Q9BRK5 362 aa17.86■□□□□ 0.45
CDK11B-201ENST00000340677 GPATCH1Q9BRR8 931 aaKnown RBP17.86■□□□□ 0.45
CDK11B-201ENST00000340677 ZNRF3Q9ULT6 936 aa17.86■□□□□ 0.45
CDK11B-201ENST00000340677 PCDHB4Q9Y5E5 795 aa17.86■□□□□ 0.45
CDK11B-201ENST00000340677 MAN1A1P33908 653 aa17.85■□□□□ 0.45
CDK11B-201ENST00000340677 KRT20P35900 424 aa17.85■□□□□ 0.45
CDK11B-201ENST00000340677 IARSP41252 1262 aaKnown RBP17.85■□□□□ 0.45
CDK11B-201ENST00000340677 CDK8P49336 464 aa17.85■□□□□ 0.45
CDK11B-201ENST00000340677 SCNN1DP51172 638 aa17.85■□□□□ 0.45
CDK11B-201ENST00000340677 GALNT1Q10472 559 aaPredicted RBP17.85■□□□□ 0.45
CDK11B-201ENST00000340677 EMBQ6PCB8 327 aa17.85■□□□□ 0.45
CDK11B-201ENST00000340677 ASRGL1Q7L266 308 aa17.85■□□□□ 0.45
CDK11B-201ENST00000340677 DDX42Q86XP3 938 aaKnown RBP eCLIP17.85■□□□□ 0.45
CDK11B-201ENST00000340677 CD302Q8IX05 232 aa17.85■□□□□ 0.45
CDK11B-201ENST00000340677 NUDCD1Q96RS6 583 aa17.85■□□□□ 0.45
CDK11B-201ENST00000340677 INO80B-WBP1J3KQ70 363 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 PSMA3P25788 255 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 VHLP40337 213 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 NOVP48745 357 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 KDSRQ06136 332 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 NFIAQ12857 509 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 TBX2Q13207 712 aaPredicted RBP17.84■□□□□ 0.45
CDK11B-201ENST00000340677 NFE2L1Q14494 772 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 WDR44Q5JSH3 913 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 CROCCP3Q8IVE0 287 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 GOT1L1Q8NHS2 421 aaPredicted RBP17.84■□□□□ 0.45
CDK11B-201ENST00000340677 NEDD1Q8NHV4 660 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 PIGOQ8TEQ8 1089 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 CAVIN3Q969G5 261 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 NPHP3-ACAD11A0A0J9YXS1 232 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 OR6B1O95007 311 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 ADKP55263 362 aaKnown RBP17.84■□□□□ 0.45
CDK11B-201ENST00000340677 COPS2P61201 443 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 TFAP4Q01664 338 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 OCRLQ01968 901 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 EVX2Q03828 476 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 PTK2Q05397 1052 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 TROAPQ12815 778 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 ITGA9Q13797 1035 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 FAM47EQ6ZV65 393 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 NIM1KQ8IY84 436 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 AGBL3Q8NEM8 1001 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 DYNLL2Q96FJ2 89 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 ARMC7Q9H6L4 198 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 DPP7Q9UHL4 492 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 PCDHA7Q9UN72 937 aa17.84■□□□□ 0.45
CDK11B-201ENST00000340677 SMIM31A0A1B0GVY4 71 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 GM2AP17900 193 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 VPS41P49754 854 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 CD300CQ08708 224 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 SSRP1Q08945 709 aaKnown RBP17.83■□□□□ 0.45
CDK11B-201ENST00000340677 ZCWPW2Q504Y3 356 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 TRAPPC11Q7Z392 1133 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 BTBD6Q96KE9 485 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 VPS35Q96QK1 796 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 CD93Q9NPY3 652 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 VPS51Q9UID3 782 aa17.83■□□□□ 0.45
CDK11B-201ENST00000340677 HERC5Q9UII4 1024 aaKnown RBP17.83■□□□□ 0.45
CDK11B-201ENST00000340677 KRBA1A5PL33 1030 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 SOWAHDA6NJG2 315 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 EXTL3O43909 919 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 GMNNO75496 209 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 POLR2CP19387 275 aaPredicted RBP17.83■□□□□ 0.44
CDK11B-201ENST00000340677 SF3A3Q12874 501 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDK11B-201ENST00000340677 DSC3Q14574 896 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 GALNTL6Q49A17 601 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 TRIM22Q8IYM9 498 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDK11B-201ENST00000340677 RSAD2Q8WXG1 361 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 CFAP36Q96G28 342 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 CCDC43Q96MW1 224 aaKnown RBP17.83■□□□□ 0.44
CDK11B-201ENST00000340677 NELL2Q99435 816 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 RNF26Q9BY78 433 aaPredicted RBP17.83■□□□□ 0.44
CDK11B-201ENST00000340677 RNF38Q9H0F5 515 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 WNT8AQ9H1J5 351 aa17.83■□□□□ 0.44
CDK11B-201ENST00000340677 TRNAU1APQ9NX07 287 aaKnown RBP17.83■□□□□ 0.44
CDK11B-201ENST00000340677 A6NL46 340 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 HLA-DOAP06340 250 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 RARBP10826 455 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 HSPA9P38646 679 aaKnown RBP17.82■□□□□ 0.44
CDK11B-201ENST00000340677 SLC1A1P43005 524 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 NDUFA8P51970 172 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 MYL6P60660 151 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 SHEQ5VZ18 495 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 MTMR14Q8NCE2 650 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 CHMP6Q96FZ7 201 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 ZBED2Q9BTP6 218 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 DDX4Q9NQI0 724 aaKnown RBP17.82■□□□□ 0.44
CDK11B-201ENST00000340677 UCKL1Q9NWZ5 548 aa17.82■□□□□ 0.44
CDK11B-201ENST00000340677 DMGDHQ9UI17 866 aaKnown RBP17.82■□□□□ 0.44
CDK11B-201ENST00000340677 DICER1Q9UPY3 1922 aaKnown RBP17.82■□□□□ 0.44
CDK11B-201ENST00000340677 YKT6O15498 198 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms