RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 Q6YL49 198 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 RHOT1Q8IXI2 618 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 HDAC10Q969S8 669 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 NEU1Q99519 415 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 PRO3102Q9H379 93 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 TOR3AQ9H497 397 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 RNF181Q9P0P0 153 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 TRHDEQ9UKU6 1024 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 RUVBL1Q9Y265 456 aaKnown RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 NKTRP30414 1462 aaKnown RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 PEAK1Q9H792 1746 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 KLHL33A6NCF5 533 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 UNC119BA6NIH7 251 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 NDUFS2O75306 463 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 MYBL2P10244 700 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 DDCP20711 480 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 GCSHP23434 173 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 ITKQ08881 620 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 ABCB5Q2M3G0 1257 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 ABHD17BQ5VST6 288 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 FOXR2Q6PJQ5 311 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 RSPH3Q86UC2 560 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 CBARPQ8N350 705 aaPredicted RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 OR2I1PQ8NGU4 316 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 ZG16BQ96DA0 208 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 COQ10AQ96MF6 247 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 TDP1Q9NUW8 608 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 INTUQ9ULD6 942 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 ARHGEF5Q12774 1597 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 PNPLA7Q6ZV29 1317 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 MYBBP1AQ9BQG0 1328 aaKnown RBP2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 THSD7AQ9UPZ6 1657 aa2.14□□□□□ -2.07
CCDC144A-201ENST00000328495 A0A1B0GTW7 788 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 OVOL3O00110 214 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 AMY1AP04745 511 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 KRT85P78386 507 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 PPP4R3AQ6IN85 833 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 UBE3BQ7Z3V4 1068 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 CMTR2Q8IYT2 770 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 FITM2Q8N6M3 262 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 BEND2Q8NDZ0 799 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 NLGN4YQ8NFZ3 816 aaPredicted RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 JADE3Q92613 823 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 DPF2Q92785 391 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 CAVIN3Q969G5 261 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 RNF31Q96EP0 1072 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 FAXDC2Q96IV6 333 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ADAM2Q99965 735 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 C11orf54Q9H0W9 315 aaPredicted RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 DKK2Q9UBU2 259 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 TESQ9UGI8 421 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 SLC23A1Q9UHI7 598 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 MAP3K2Q9Y2U5 619 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 PRDM15P57071 1507 aaPredicted RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 PIPSLA2A3N6 862 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 WNT10BO00744 389 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 KIAA0391O15091 583 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 SGTAO43765 313 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 SHOX2O60902 331 aaPredicted RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 HAUS5O94927 633 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 SPDEFO95238 335 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 GPANK1O95872 356 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 RPLP2P05387 115 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 FGFR4P22455 802 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 TGM1P22735 817 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 CTXN1P60606 82 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ATP8B2P98198 1209 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 CDC42EP1Q00587 391 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 OCA2Q04671 838 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 MTMR1Q13613 665 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 TP53BP2Q13625 1128 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 KRTAP15-1Q3LI76 137 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 PNMA8AQ86V59 439 aaPredicted RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 FAM43AQ8N2R8 423 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 TMEM132CQ8N3T6 1108 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ZGPATQ8N5A5 531 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 PRPF38AQ8NAV1 312 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ZCRB1Q8TBF4 217 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 TMX3Q96JJ7 454 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 MYOCQ99972 504 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ALOXE3Q9BYJ1 711 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 GALNT9Q9HCQ5 603 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 FBXO34Q9NWN3 711 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 KCNE5Q9UJ90 142 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 MTO1Q9Y2Z2 717 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ASXL1Q8IXJ9 1541 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ERN1O75460 977 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 LMNAP02545 664 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ITGAMP11215 1152 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 C5AR1P21730 350 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 FDXRP22570 491 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 PROZP22891 400 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 SLC6A2P23975 617 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 CDKN1CP49918 316 aaPredicted RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 AMPD3Q01432 767 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 FAM50AQ14320 339 aaKnown RBP2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 RAB39AQ14964 217 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 ERCC6LQ2NKX8 1250 aa2.13□□□□□ -2.07
CCDC144A-201ENST00000328495 DACT2Q5SW24 774 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 4376.4 ms