RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 SNX12Q9UMY4 172 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 CLCA2Q9UQC9 943 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 LSM8O95777 96 aaKnown RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 IFNA14P01570 189 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 RARBP10826 455 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 GUCY1A3Q02108 690 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 NFX1Q12986 1120 aaKnown RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 CYFIP2Q96F07 1278 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 CARD9Q9H257 536 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 DCDC2Q9UHG0 476 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 NCOA3Q9Y6Q9 1424 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 NBPF26B4DH59 902 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 RASSF9O75901 435 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 NPTXRO95502 500 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 DYNLL1P63167 89 aaKnown RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 ARHGEF38Q9NXL2 777 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 C3P01024 1663 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 NR2C2P49116 596 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 CYP27A1Q02318 531 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 NCOA4Q13772 614 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 CTTNQ14247 550 aaKnown RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 OOSP2Q86WS3 158 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 DDIASQ8IXT1 998 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 RASGRP4Q8TDF6 673 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 MAGEB10Q96LZ2 347 aaPredicted RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 KCNN4O15554 427 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 POU5F1BQ06416 359 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 LRRC41Q15345 812 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 NT5DC4Q86YG4 428 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 C17orf53Q8N3J3 647 aaPredicted RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 SLC7A14Q8TBB6 771 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 DNAJB2P25686 324 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 ZBED8Q8IZ13 594 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 PPM1NQ8N819 430 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 OR6J1Q8NGC5 347 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 MAGEB16A2A368 324 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 PRR23D1E9PI22 279 aaPredicted RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 PRR23D2P0DMB1 279 aaPredicted RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 KRT17Q04695 432 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 DMC1Q14565 340 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 BOLA3Q53S33 107 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 IZUMO3Q5VZ72 239 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 SPATA4Q8NEY3 305 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 ADAM30Q9UKF2 790 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 SYNPO2Q9UMS6 1093 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 SOX13Q9UN79 622 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 DRG1Q9Y295 367 aaKnown RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 SLCO1A2P46721 670 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 RABGAP1LQ5R372 815 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 WLSQ5T9L3 541 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 ELAC2Q9BQ52 826 aaKnown RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 NKRFO15226 690 aaKnown RBP eCLIP13.18□□□□□ -0.32e-17■□□□□ 8.6
FN1-201ENST00000323926 FBXO21O94952 628 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 NAB2Q15742 525 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 SYCP2LQ5T4T6 812 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 CAPRIN2Q6IMN6 1127 aaKnown RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 STK39Q9UEW8 545 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 RGPD8O14715 1765 aaPredicted RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 GUCA1CO95843 209 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 CPB1P15086 417 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 PCSK2P16519 638 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 CCND1P24385 295 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 GRK3P35626 688 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 GUCA1AP43080 201 aaPredicted RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 TRIM9Q9C026 710 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 RNASEH1O60930 286 aaKnown RBP13.18□□□□□ -0.3
FN1-201ENST00000323926 SOAT2O75908 522 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 ABCB6Q9NP58 842 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 WHRNQ9P202 907 aa13.18□□□□□ -0.3
FN1-201ENST00000323926 A0A1B0GTH6 734 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 PLD3Q8IV08 490 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 DDI1Q8WTU0 396 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 RIN2Q8WYP3 895 aaPredicted RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 ZC3H7BQ9UGR2 993 aaKnown RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 AFF2P51816 1311 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 DFFAO00273 331 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 CETPP11597 493 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 CUL3Q13618 768 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 SNRNP35Q16560 246 aaKnown RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 CACHD1Q5VU97 1274 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 CDR2LQ86X02 465 aaPredicted RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 OSTNP61366 133 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 SPDYE7PQ495Y7 208 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 RNF180Q86T96 592 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 OLFM1Q99784 485 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 C1QTNF7Q9BXJ2 289 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 LIMA1Q9UHB6 759 aaKnown RBP13.17□□□□□ -0.3
FN1-201ENST00000323926 FIS1Q9Y3D6 152 aa13.17□□□□□ -0.3
FN1-201ENST00000323926 SH3BP1Q9Y3L3 701 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms