RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CEP120Q8N960 986 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 ETNPPLQ8TBG4 499 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 CARD9Q9H257 536 aa16.08■□□□□ 0.16
VARS2-201ENST00000321897 EIF3DO15371 548 aaKnown RBP eCLIP16.07■□□□□ 0.163e-6■■■□□ 15.5
VARS2-201ENST00000321897 ZBED1O96006 694 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 P4HA1P13674 534 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 EPHB2P29323 1055 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 COILP38432 576 aaPredicted RBP16.07■□□□□ 0.16
VARS2-201ENST00000321897 GCLCP48506 637 aaPredicted RBP16.07■□□□□ 0.16
VARS2-201ENST00000321897 CLCN3P51790 818 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 TMPRSS15P98073 1019 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 SLC15A2Q16348 729 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 GLRA4Q5JXX5 417 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 NXNQ6DKJ4 435 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 GPAT2Q6NUI2 795 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 ALG3Q92685 438 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 HOXC10Q9NYD6 342 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 KRT16P08779 473 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 PDGFRBP09619 1106 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 NCF2P19878 526 aaPredicted RBP16.07■□□□□ 0.16
VARS2-201ENST00000321897 ADORA2BP29275 332 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 ATXN3P54252 364 aaPredicted RBP16.07■□□□□ 0.16
VARS2-201ENST00000321897 JAG1P78504 1218 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 CENPUQ71F23 418 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 TRIM11Q96F44 468 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 SLC4A1P02730 911 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 RAP1GAPP47736 663 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 Q4G0T1 1027 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 RABGAP1LQ5R372 815 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 DLK2Q6UY11 383 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 DNAAF3Q8N9W5 541 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 B4GALNT2Q8NHY0 566 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.07■□□□□ 0.16
VARS2-201ENST00000321897 TTYH3Q9C0H2 523 aa16.07■□□□□ 0.16
VARS2-201ENST00000321897 SETD1AO15047 1707 aaKnown RBP16.07■□□□□ 0.16
VARS2-201ENST00000321897 UGCGQ16739 394 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 SNF8Q96H20 258 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 NEUROG2Q9H2A3 272 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 TOPAZ1Q8N9V7 1692 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 EME2A4GXA9 379 aaPredicted RBP16.06■□□□□ 0.16
VARS2-201ENST00000321897 KRT3P12035 628 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 MX2P20592 715 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 SLFN12LQ6IEE8 588 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 CATSPER4Q7RTX7 472 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 RASSF3Q86WH2 238 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 RPS6KC1Q96S38 1066 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 MKNK1Q9BUB5 465 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 TMEM8AQ9HCN3 771 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 CHST7Q9NS84 486 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 NDE1Q9NXR1 346 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 ZSCAN5DPP0CG00 497 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 RPL21P46778 160 aaKnown RBP16.06■□□□□ 0.16
VARS2-201ENST00000321897 NLRP11P59045 1033 aaKnown RBP16.06■□□□□ 0.16
VARS2-201ENST00000321897 THOC5Q13769 683 aaKnown RBP16.06■□□□□ 0.16
VARS2-201ENST00000321897 XKR3Q5GH77 459 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 PRPF31Q8WWY3 499 aaKnown RBP16.06■□□□□ 0.16
VARS2-201ENST00000321897 CDC42EP4Q9H3Q1 356 aaKnown RBP16.06■□□□□ 0.16
VARS2-201ENST00000321897 OLFML3Q9NRN5 406 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 CHMP2BQ9UQN3 213 aa16.06■□□□□ 0.16
VARS2-201ENST00000321897 ATP5HO75947 161 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 ADRB2P07550 413 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 TXNP10599 105 aaKnown RBP16.05■□□□□ 0.16
VARS2-201ENST00000321897 DUOXA2Q1HG44 320 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 KDELC2Q7Z4H8 507 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 DDX50Q9BQ39 737 aaKnown RBP16.05■□□□□ 0.16
VARS2-201ENST00000321897 THTPAQ9BU02 230 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 IGSF9BQ9UPX0 1349 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 CASQ2O14958 399 aaPredicted RBP16.05■□□□□ 0.16
VARS2-201ENST00000321897 CST8O60676 142 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 PRKCBP05771 671 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 RARAP10276 462 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 SERPINB3P29508 390 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 GPC3P51654 580 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 AGGF1Q8N302 714 aaeCLIP16.05■□□□□ 0.16
VARS2-201ENST00000321897 ATL2Q8NHH9 583 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 PPP1R36Q96LQ0 422 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 AGAP1Q9UPQ3 857 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 NUB1Q9Y5A7 615 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 SCINQ9Y6U3 715 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 GOLGB1Q14789 3259 aaKnown RBP16.05■□□□□ 0.16
VARS2-201ENST00000321897 CDH16O75309 829 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 ENTPD5O75356 428 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 ITIH4Q14624 930 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 CRY2Q49AN0 593 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 TMEM121Q9BTD3 319 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 DNAI2Q9GZS0 605 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 ERVK-5Q9HDB9 667 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 C2CD2Q9Y426 696 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 PCDHB2Q9Y5E7 798 aa16.05■□□□□ 0.16
VARS2-201ENST00000321897 FAM47DPA6NHR8 397 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 APRTP07741 180 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 CDH8P55286 799 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 YWHAEP62258 255 aaKnown RBP16.04■□□□□ 0.16
VARS2-201ENST00000321897 TFDP1Q14186 410 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 FAM43BQ6ZT52 329 aaPredicted RBP16.04■□□□□ 0.16
VARS2-201ENST00000321897 AGAP3Q96P47 875 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 SLC38A10Q9HBR0 1119 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 NEU2Q9Y3R4 380 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 SNX9Q9Y5X1 595 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms