RNA–Protein interactions for RNA: ENST00000312349.4

FNDC9-201, Transcript of fibronectin type III domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC9, Length 2,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9-201ENST00000312349 PDZD7Q9H5P4 517 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 FAM114A2Q9NRY5 505 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 CYTH4Q9UIA0 394 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 AKT3Q9Y243 479 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 GRIN2DO15399 1336 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 FSCN2O14926 492 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 GH1P01241 217 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 SHBGP04278 402 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 STAG3L1P0CL83 205 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 ARF4P18085 180 aaPredicted RBP12.23□□□□□ -0.45
FNDC9-201ENST00000312349 MMP8P22894 467 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 TRPC3Q13507 836 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 LAMC2Q13753 1193 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 TFDP1Q14186 410 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 SGSM1Q2NKQ1 1148 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 TXNRD3NBQ6F5E7 133 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 GPR142Q7Z601 462 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 CD302Q8IX05 232 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 CCDC105Q8IYK2 499 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.23□□□□□ -0.45
FNDC9-201ENST00000312349 LENG1Q96BZ8 264 aaPredicted RBP12.23□□□□□ -0.45
FNDC9-201ENST00000312349 ACSF2Q96CM8 615 aaPredicted RBP12.23□□□□□ -0.45
FNDC9-201ENST00000312349 FMO2Q99518 471 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 RAB17Q9H0T7 212 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 CENPHQ9H3R5 247 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 TNFSF13BQ9Y275 285 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 HTTP42858 3142 aa12.23□□□□□ -0.45
FNDC9-201ENST00000312349 TCRBV5S1A1TA0A578 114 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 FAM187AA6NFU0 413 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 TLR3O15455 904 aaKnown RBP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 B4GALT4O60513 344 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 SHOX2O60902 331 aaPredicted RBP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 PPFIA2O75334 1257 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 RALAP11233 206 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 CETPP11597 493 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 TMEM62Q0P6H9 643 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 GPR162Q16538 588 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 SKIDA1Q1XH10 827 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 DENND1BQ6P3S1 775 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 MTHFD1LQ6UB35 978 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 PRUNE1Q86TP1 453 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 NPLOC4Q8TAT6 608 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 MCEEQ96PE7 176 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 SMYD3Q9H7B4 428 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 CITO14578 2027 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 RBM47A0AV96 593 aaKnown RBP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 F8VP50 259 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 PI4K2BG5E9Z4 385 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 H3BRB1 525 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 ITGB3P05106 788 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 TMOD1P28289 359 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 AP3M2P53677 418 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 C1QBPQ07021 282 aaKnown RBP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 PDCLQ13371 301 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 TRIP13Q15645 432 aaPredicted RBP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 WDR72Q3MJ13 1102 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 SGO2Q562F6 1265 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 C12orf50Q8NA57 414 aaPredicted RBP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 LRRC45Q96CN5 670 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 TRIM11Q96F44 468 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 MAML3Q96JK9 1138 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 TUT1Q9H6E5 874 aaKnown RBP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 RPF1Q9H9Y2 349 aaKnown RBP12.22□□□□□ -0.45
FNDC9-201ENST00000312349 TMBIM4Q9HC24 238 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 VTA1Q9NP79 307 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 RNF19AQ9NV58 838 aa12.22□□□□□ -0.45
FNDC9-201ENST00000312349 SCN1AP35498 2009 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 HSPA6P17066 643 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 SSR1P43307 286 aaKnown RBP12.21□□□□□ -0.45
FNDC9-201ENST00000312349 IRAK1P51617 712 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 CCNA1P78396 465 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 SLC10A6Q3KNW5 377 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 ZNF484Q5JVG2 852 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 LIN9Q5TKA1 542 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 TRIM72Q6ZMU5 477 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 DPP9Q86TI2 863 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 CCDC50Q8IVM0 306 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 EXOC8Q8IYI6 725 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 KIAA0319LQ8IZA0 1049 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 RNF25Q96BH1 459 aaPredicted RBP12.21□□□□□ -0.45
FNDC9-201ENST00000312349 ATP6V1G3Q96LB4 118 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 JPH2Q9BR39 696 aaPredicted RBP12.21□□□□□ -0.45
FNDC9-201ENST00000312349 NFKBIZQ9BYH8 718 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 LRRC19Q9H756 370 aa12.21□□□□□ -0.45
FNDC9-201ENST00000312349 IQCA1LA6NCM1 817 aa12.2□□□□□ -0.46
FNDC9-201ENST00000312349 TMEM191CA6NGB0 347 aa12.2□□□□□ -0.46
FNDC9-201ENST00000312349 TSPAN1O60635 241 aa12.2□□□□□ -0.46
FNDC9-201ENST00000312349 TNNC2P02585 160 aa12.2□□□□□ -0.46
FNDC9-201ENST00000312349 PSMC4P43686 418 aa12.2□□□□□ -0.46
FNDC9-201ENST00000312349 PHKA2P46019 1235 aa12.2□□□□□ -0.46
FNDC9-201ENST00000312349 GTF2A2P52657 109 aa12.2□□□□□ -0.46
FNDC9-201ENST00000312349 GUCY1A3Q02108 690 aa12.2□□□□□ -0.46
FNDC9-201ENST00000312349 KLF1Q13351 362 aaPredicted RBP12.2□□□□□ -0.46
FNDC9-201ENST00000312349 GRB14Q14449 540 aa12.2□□□□□ -0.46
FNDC9-201ENST00000312349 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
FNDC9-201ENST00000312349 UHMK1Q8TAS1 419 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms