RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 GPR88Q9GZN0 384 aa10.96□□□□□ -0.65
APOBEC3F-201ENST00000308521 SEMA4AQ9H3S1 761 aa10.96□□□□□ -0.65
APOBEC3F-201ENST00000308521 TBX20Q9UMR3 447 aa10.96□□□□□ -0.65
APOBEC3F-201ENST00000308521 FRMD4BQ9Y2L6 1034 aa10.96□□□□□ -0.65
APOBEC3F-201ENST00000308521 IGKV6D-21A0A0A0MT36 114 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 RASGRF2O14827 1237 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 DKC1O60832 514 aaKnown RBP eCLIP10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 NPTXRO95502 500 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 ANP32DO95626 131 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 GJB1P08034 283 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 RFX1P22670 979 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 ADSSP30520 456 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 RPL21P46778 160 aaKnown RBP10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 MYO1EQ12965 1108 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 AUHQ13825 339 aaKnown RBP10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 CYP1B1Q16678 543 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 TMEM132AQ24JP5 1023 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 SAPCD2Q86UD0 394 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 LRRC71Q8N4P6 559 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 ASAP3Q8TDY4 903 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 ART4Q93070 314 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 ELMO3Q96BJ8 720 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 PARK7Q99497 189 aaKnown RBP10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 MPHOSPH6Q99547 160 aaKnown RBP10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 LMCD1Q9NZU5 365 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZFATQ9P243 1243 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 USP15Q9Y4E8 981 aaPredicted RBP10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 ALG6Q9Y672 507 aa10.96□□□□□ -0.66
APOBEC3F-201ENST00000308521 LRRIQ4A6NIV6 560 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZSCAN9O15535 394 aaPredicted RBP10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 RARAP10276 462 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 CCND1P24385 295 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 COPB2P35606 906 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 NCKAP1LP55160 1127 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 NCALDP61601 193 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 SNX1Q13596 522 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZNF568Q3ZCX4 644 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 CBWD6Q4V339 395 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 LRRC23Q53EV4 343 aaPredicted RBP10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 CBWD3Q5JTY5 395 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 CBWD5Q5RIA9 395 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 THEMIS2Q5TEJ8 643 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 TRMT10CQ7L0Y3 403 aaKnown RBP10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 RASAL3Q86YV0 1011 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 SHCBP1Q8NEM2 672 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 ATL2Q8NHH9 583 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 VTI1AQ96AJ9 217 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 MAF1Q9H063 256 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 THAP2Q9H0W7 228 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 DMAC2Q9NW81 257 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 HSPBP1Q9NZL4 362 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 COG5Q9UP83 839 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 UBE4BO95155 1302 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 UNCXA6NJT0 531 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 SNAI1O95863 264 aaPredicted RBP10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 CLTAP09496 248 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 KRT13P13646 458 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 ABCB4P21439 1286 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 IGBP1P78318 339 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZNF211Q13398 564 aaPredicted RBP10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 CUL3Q13618 768 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 TTLL4Q14679 1199 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 ACCSLQ4AC99 568 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 TAPT1Q6NXT6 567 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 TAS1R3Q7RTX0 852 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 TBC1D1Q86TI0 1168 aaPredicted RBP10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 CBWD2Q8IUF1 395 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 NPLOC4Q8TAT6 608 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 SLC7A3Q8WY07 619 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 KIFAP3Q92845 792 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 CCDC127Q96BQ5 260 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 C18orf8Q96DM3 657 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 STAMBPL1Q96FJ0 436 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 POP1Q99575 1024 aaKnown RBP10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 GORASP1Q9BQQ3 440 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 ZSWIM1Q9BR11 485 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 TMEM206Q9H813 350 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 ABCF3Q9NUQ8 709 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 SLC5A4Q9NY91 659 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 AGAP1Q9UPQ3 857 aa10.95□□□□□ -0.66
APOBEC3F-201ENST00000308521 ASB14A6NK59 587 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 O00370 1275 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 FAM163BP0C2L3 166 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 GLRA2P23416 452 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 BNIP1Q12981 228 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 LBRQ14739 615 aaKnown RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 TAF1CQ15572 869 aaPredicted RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 KCTD19Q17RG1 926 aaPredicted RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 FAM133BQ5BKY9 247 aaKnown RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 SLC39A4Q6P5W5 647 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 ADAT2Q7Z6V5 191 aaKnown RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 MCPH1Q8NEM0 835 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 EPS8L3Q8TE67 593 aaKnown RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 PPP1R16BQ96T49 567 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 AGPAT1Q99943 283 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 INTS2Q9H0H0 1204 aaKnown RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 RNPEPQ9H4A4 650 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 NRBP2Q9NSY0 501 aa10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.94□□□□□ -0.66
APOBEC3F-201ENST00000308521 MORF4L1Q9UBU8 362 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms