RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 CCL15Q16663 113 aa17.55■□□□□ 0.4
TVP23B-201ENST00000307767 DNAJC21Q5F1R6 531 aaKnown RBP17.55■□□□□ 0.4
TVP23B-201ENST00000307767 ZNF467Q7Z7K2 595 aaPredicted RBP17.55■□□□□ 0.4
TVP23B-201ENST00000307767 PPP1R16BQ96T49 567 aa17.55■□□□□ 0.4
TVP23B-201ENST00000307767 PRMT7Q9NVM4 692 aaPredicted RBP17.55■□□□□ 0.4
TVP23B-201ENST00000307767 PCDHGC3Q9UN70 934 aa17.55■□□□□ 0.4
TVP23B-201ENST00000307767 UNCXA6NJT0 531 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 CETPP11597 493 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 IVDP26440 423 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 ZNF699Q32M78 642 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 SCARA5Q6ZMJ2 495 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 KDM7AQ6ZMT4 941 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 UBLCP1Q8WVY7 318 aaPredicted RBP17.54■□□□□ 0.4
TVP23B-201ENST00000307767 ATG4AQ8WYN0 398 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 RNF25Q96BH1 459 aaPredicted RBP17.54■□□□□ 0.4
TVP23B-201ENST00000307767 PTPN18Q99952 460 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 BCO2Q9BYV7 579 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 ZNF408Q9H9D4 720 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 CYTH4Q9UIA0 394 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 MTUS1Q9ULD2 1270 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 NEU2Q9Y3R4 380 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 EVPLQ92817 2033 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 VTNP04004 478 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 STAG3L1P0CL83 205 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 HOXD8P13378 290 aaPredicted RBP17.54■□□□□ 0.4
TVP23B-201ENST00000307767 SMPD1P17405 629 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 RAP1GAPP47736 663 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 CCNA1P78396 465 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 TRPC3Q13507 836 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 SLC10A6Q3KNW5 377 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 ATP13A4Q4VNC1 1196 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 SPDYCQ5MJ68 293 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 ART4Q93070 314 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 CPB2Q96IY4 423 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 MRPL47Q9HD33 250 aaKnown RBP17.54■□□□□ 0.4
TVP23B-201ENST00000307767 ATP8A1Q9Y2Q0 1164 aa17.54■□□□□ 0.4
TVP23B-201ENST00000307767 PLXNA1Q9UIW2 1896 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 SCN4AP35499 1836 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 PSTPIP1O43586 416 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 LSM8O95777 96 aaKnown RBP17.53■□□□□ 0.4
TVP23B-201ENST00000307767 ARF4P18085 180 aaPredicted RBP17.53■□□□□ 0.4
TVP23B-201ENST00000307767 MAN1A1P33908 653 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 CDH8P55286 799 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 ADCY2Q08462 1091 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 MTMR3Q13615 1198 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 TTC19Q6DKK2 380 aaPredicted RBP17.53■□□□□ 0.4
TVP23B-201ENST00000307767 DENND1BQ6P3S1 775 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 MTHFD1LQ6UB35 978 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 GPR142Q7Z601 462 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 ANKRD23Q86SG2 305 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 CCDC105Q8IYK2 499 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 KATNAL2Q8IYT4 538 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 TWNKQ96RR1 684 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 CAPS2Q9BXY5 557 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 DCLK3Q9C098 648 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 RPF1Q9H9Y2 349 aaKnown RBP17.53■□□□□ 0.4
TVP23B-201ENST00000307767 PARVAQ9NVD7 372 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 TJP2Q9UDY2 1190 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 RASAL2Q9UJF2 1139 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 PTPN22Q9Y2R2 807 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 PLXNB2O15031 1838 aa17.53■□□□□ 0.4
TVP23B-201ENST00000307767 MAGEB2O15479 319 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 STRNO43815 780 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 PPFIA4O75335 1185 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 SHBGP04278 402 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 MCF2P10911 925 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 RALAP11233 206 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 PHKA2P46019 1235 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 GRB14Q14449 540 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 JADE1Q6IE81 842 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 RHOT1Q8IXI2 618 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 SCINQ9Y6U3 715 aa17.52■□□□□ 0.4
TVP23B-201ENST00000307767 IQCA1LA6NCM1 817 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 HMGB1P1B2RPK0 211 aaPredicted RBP17.52■□□□□ 0.39
TVP23B-201ENST00000307767 IL18RAPO95256 599 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 TNNC2P02585 160 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 ATP1A2P50993 1020 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 GTF2A2P52657 109 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 RAD23BP54727 409 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 SNX1Q13596 522 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 SGO2Q562F6 1265 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 SMYD5Q6GMV2 418 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 RHBDF2Q6PJF5 856 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 PNMA8AQ86V59 439 aaPredicted RBP17.52■□□□□ 0.39
TVP23B-201ENST00000307767 ANKRD36BP1Q96IX9 119 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 MAML3Q96JK9 1138 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 HEMGNQ9BXL5 484 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 AAASQ9NRG9 546 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 NXF1Q9UBU9 619 aaKnown RBP17.52■□□□□ 0.39
TVP23B-201ENST00000307767 HMGXB4Q9UGU5 601 aa17.52■□□□□ 0.39
TVP23B-201ENST00000307767 COL1A2P08123 1366 aa17.51■□□□□ 0.39
TVP23B-201ENST00000307767 DCDC2CA8MYV0 355 aa17.51■□□□□ 0.39
TVP23B-201ENST00000307767 H3BRB1 525 aa17.51■□□□□ 0.39
TVP23B-201ENST00000307767 EIF4BP23588 611 aaKnown RBP17.51■□□□□ 0.39
TVP23B-201ENST00000307767 TXNRD3NBQ6F5E7 133 aa17.51■□□□□ 0.39
TVP23B-201ENST00000307767 PPP1R2P3Q6NXS1 205 aa17.51■□□□□ 0.39
TVP23B-201ENST00000307767 ILDR2Q71H61 639 aa17.51■□□□□ 0.39
TVP23B-201ENST00000307767 KIAA0319LQ8IZA0 1049 aa17.51■□□□□ 0.39
TVP23B-201ENST00000307767 NPLOC4Q8TAT6 608 aa17.51■□□□□ 0.39
TVP23B-201ENST00000307767 RUNDC3BQ96NL0 473 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms