RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 TPCN1Q9ULQ1 816 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 PCDHA12Q9UN75 941 aa12.97□□□□□ -0.33
SMIM4-201ENST00000307106 HELZP42694 1942 aaKnown RBP12.97□□□□□ -0.33
SMIM4-201ENST00000307106 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 PATE3B3GLJ2 98 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 PRAMEF12O95522 483 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 EGFP01133 1207 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 XRCC6P12956 609 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMIM4-201ENST00000307106 ATP2B1P20020 1258 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 MCM4P33991 863 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 MCM2P49736 904 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 YARSP54577 528 aaKnown RBP12.96□□□□□ -0.33
SMIM4-201ENST00000307106 ATF7IP2Q5U623 682 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 PIK3AP1Q6ZUJ8 805 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 PROSER1Q86XN7 944 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 CEP120Q8N960 986 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 APPL2Q8NEU8 664 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 BEST2Q8NFU1 509 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 DEPTORQ8TB45 409 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 SUSD3Q96L08 255 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 PGLYRP2Q96PD5 576 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 ATXN3LQ9H3M9 355 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 TOPORSQ9NS56 1045 aaPredicted RBP12.96□□□□□ -0.33
SMIM4-201ENST00000307106 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.33
SMIM4-201ENST00000307106 FREM2Q5SZK8 3169 aa12.96□□□□□ -0.33
SMIM4-201ENST00000307106 TRDMT1O14717 391 aaKnown RBP12.95□□□□□ -0.34
SMIM4-201ENST00000307106 CPLX1O14810 134 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 VNN2O95498 520 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 APBB3O95704 486 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 RPS6KB1P23443 525 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 GABRR2P28476 465 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 NAMPTP43490 491 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 ALDH1A3P47895 512 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 IRX4P78413 519 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 DUSP4Q13115 394 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 ARHGAP15Q53QZ3 475 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 XKR4Q5GH76 650 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 PMS2CLQ68D20 193 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 C19orf48Q6RUI8 117 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 ALKAL1Q6UXT8 129 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 GAREM2Q75VX8 874 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 APBB1IPQ7Z5R6 666 aaPredicted RBP12.95□□□□□ -0.34
SMIM4-201ENST00000307106 PDZD3Q86UT5 571 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 CHFRQ96EP1 664 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 ZMAT2Q96NC0 199 aaKnown RBP12.95□□□□□ -0.34
SMIM4-201ENST00000307106 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 CCDC94Q9BW85 323 aaPredicted RBP12.95□□□□□ -0.34
SMIM4-201ENST00000307106 CRISPLD1Q9H336 500 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 SLC32A1Q9H598 525 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 THG1LQ9NWX6 298 aaKnown RBP12.95□□□□□ -0.34
SMIM4-201ENST00000307106 EBF1Q9UH73 591 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 GPSM3Q9Y4H4 160 aa12.95□□□□□ -0.34
SMIM4-201ENST00000307106 IGSF10Q6WRI0 2623 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 OR4Q2P0C623 313 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
SMIM4-201ENST00000307106 RPL9P32969 192 aaKnown RBP12.94□□□□□ -0.34
SMIM4-201ENST00000307106 GRM5P41594 1212 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 EVCP57679 992 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 OSTNP61366 133 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 YWHAHQ04917 246 aaPredicted RBP12.94□□□□□ -0.34
SMIM4-201ENST00000307106 RUNX3Q13761 415 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 NT5DC1Q5TFE4 455 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 SYT13Q7L8C5 426 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 CYP2U1Q7Z449 544 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 DNAJB7Q7Z6W7 309 aaPredicted RBP12.94□□□□□ -0.34
SMIM4-201ENST00000307106 RPLP0P6Q8NHW5 317 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 KIFC3Q9BVG8 833 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 TASP1Q9H6P5 420 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 TTC12Q9H892 705 aaPredicted RBP12.94□□□□□ -0.34
SMIM4-201ENST00000307106 HPS4Q9NQG7 708 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 GKN1Q9NS71 199 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 INVSQ9Y283 1065 aa12.94□□□□□ -0.34
SMIM4-201ENST00000307106 MYO18AQ92614 2054 aaKnown RBP12.93□□□□□ -0.34
SMIM4-201ENST00000307106 ACACAQ13085 2346 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 SPAARA0A1B0GVQ0 90 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 OTOL1A6NHN0 477 aaPredicted RBP12.93□□□□□ -0.34
SMIM4-201ENST00000307106 MEFVO15553 781 aaPredicted RBP12.93□□□□□ -0.34
SMIM4-201ENST00000307106 FGF19O95750 216 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 DRD1P21728 446 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 WEE1P30291 646 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 DGKEP52429 567 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 SIM1P81133 766 aaPredicted RBP12.93□□□□□ -0.34
SMIM4-201ENST00000307106 CYP4F8P98187 520 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 AMPD2Q01433 879 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 DMC1Q14565 340 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 PPP2R5AQ15172 486 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 COL28A1Q2UY09 1125 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
SMIM4-201ENST00000307106 C11orf74Q86VG3 221 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 KCNB2Q92953 911 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 PSMG2Q969U7 264 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 C18orf25Q96B23 403 aaPredicted RBP12.93□□□□□ -0.34
SMIM4-201ENST00000307106 FAM83CQ9BQN1 747 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 POLR3CQ9BUI4 534 aaPredicted RBP12.93□□□□□ -0.34
SMIM4-201ENST00000307106 SMG9Q9H0W8 520 aaKnown RBP12.93□□□□□ -0.34
SMIM4-201ENST00000307106 CDT1Q9H211 546 aa12.93□□□□□ -0.34
SMIM4-201ENST00000307106 EBF3Q9H4W6 596 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms