RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TTC4O95801 387 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 LIN9Q5TKA1 542 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 SWSAP1Q6NVH7 229 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 C1orf186Q6ZWK4 172 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 EMC1Q8N766 993 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 MCEEQ96PE7 176 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 DNPEPQ9ULA0 475 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 XRCC4Q13426 336 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 IL31Q6EBC2 164 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 LRRC6Q86X45 466 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 ADAM7Q9H2U9 754 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 PICK1Q9NRD5 415 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 HEY1Q9Y5J3 304 aa15.41■□□□□ 0.06
PTPN9-201ENST00000306726 MAPK13O15264 365 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 SMARCA1P28370 1054 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 YWHABP31946 246 aaKnown RBP15.4■□□□□ 0.06
PTPN9-201ENST00000306726 PRKCIP41743 596 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 NUMBP49757 651 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 GSCP56915 257 aaPredicted RBP15.4■□□□□ 0.06
PTPN9-201ENST00000306726 RPL7AP62424 266 aaKnown RBP15.4■□□□□ 0.06
PTPN9-201ENST00000306726 MTMR1Q13613 665 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 SPARCL1Q14515 664 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 WNT8AQ9H1J5 351 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 ACSS2Q9NR19 701 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 GABBR1Q9UBS5 961 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 FAM47DPA6NHR8 397 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 hCG_1984214I3L0E3 225 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 OPHN1O60890 802 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 SRGAP2CP0DJJ0 459 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 ESRRAP11474 423 aaPredicted RBP15.4■□□□□ 0.06
PTPN9-201ENST00000306726 TAS2R40P59535 323 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 AP3B2Q13367 1082 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 RCN1Q15293 331 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 TSNAXIP1Q2TAA8 658 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 ARHGEF16Q5VV41 709 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 SV2AQ7L0J3 742 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 THNSL1Q8IYQ7 743 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 PPM1NQ8N819 430 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 ZNF713Q8N859 430 aaPredicted RBP15.4■□□□□ 0.06
PTPN9-201ENST00000306726 STXBP5LQ9Y2K9 1186 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 RFC5P40937 340 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 CDR2Q01850 454 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 PPP2R5EQ16537 467 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 KRT39Q6A163 491 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 C11orf63Q6NUN7 778 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 FBXL13Q8NEE6 735 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 TLCD1Q96CP7 247 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 ZNF570Q96NI8 536 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 TSC22D3Q99576 134 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 RRAGCQ9HB90 399 aa15.4■□□□□ 0.06
PTPN9-201ENST00000306726 PECAM1P16284 738 aaPredicted RBP15.39■□□□□ 0.05
PTPN9-201ENST00000306726 PTGIRP43119 386 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 CCDC62Q6P9F0 684 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 ARMC2Q8NEN0 867 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 PLEKHO2Q8TD55 490 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 DCAF4Q8WV16 495 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 IMPG2Q9BZV3 1241 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 EPB41L4BQ9H329 900 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 TROVE2P10155 538 aaKnown RBP eCLIP15.39■□□□□ 0.05
PTPN9-201ENST00000306726 TFDP1Q14186 410 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 PSMD6Q15008 389 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 TMEM130Q8N3G9 435 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.39■□□□□ 0.05
PTPN9-201ENST00000306726 CDCA5Q96FF9 252 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 NAF1Q96HR8 494 aaKnown RBP15.39■□□□□ 0.05
PTPN9-201ENST00000306726 FAM111AQ96PZ2 611 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 ATP6V0A4Q9HBG4 840 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 HEY2Q9UBP5 337 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 CSADQ9Y600 493 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 LOC100653049A0A140TA62 436 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 CDH16O75309 829 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 KRT34O76011 436 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 ALDH18A1P54886 795 aaKnown RBP15.39■□□□□ 0.05
PTPN9-201ENST00000306726 FMO1Q01740 532 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 TRAF1Q13077 416 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 RFWD3Q6PCD5 774 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 VSTM1Q6UX27 236 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 C3orf62Q6ZUJ4 267 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 GMCL1P1Q8NEA9 526 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 RAB3IPQ96QF0 476 aaPredicted RBP15.39■□□□□ 0.05
PTPN9-201ENST00000306726 EHMT1Q9H9B1 1298 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 SLC4A7Q9Y6M7 1214 aa15.39■□□□□ 0.05
PTPN9-201ENST00000306726 F8VP50 259 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 STK10O94804 968 aaKnown RBP15.38■□□□□ 0.05
PTPN9-201ENST00000306726 F7P08709 466 aaPredicted RBP15.38■□□□□ 0.05
PTPN9-201ENST00000306726 GNA15P30679 374 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 JAM2P57087 298 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 ALCAMQ13740 583 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 UGCGQ16739 394 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 NLRX1Q86UT6 975 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 RFX6Q8HWS3 928 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 PPFIBP2Q8ND30 876 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 ATL2Q8NHH9 583 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 PGM2Q96G03 612 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 RPS6KC1Q96S38 1066 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 GLT8D2Q9H1C3 349 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 PAPPA2Q9BXP8 1791 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 H7C0C1 242 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 ATP5OP48047 213 aa15.38■□□□□ 0.05
PTPN9-201ENST00000306726 BMPR2Q13873 1038 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms