RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ABRAQ8N0Z2 381 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 RUBCNQ92622 972 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 KRT35Q92764 455 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 PPP1R13BQ96KQ4 1090 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 STK33Q9BYT3 514 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 VPS9D1Q9Y2B5 631 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 HMGCRP04035 888 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SMARCB1Q12824 385 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 ZNF235Q14590 738 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 FSCN1Q16658 493 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SCARA5Q6ZMJ2 495 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SYT2Q8N9I0 419 aaPredicted RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 ASAP3Q8TDY4 903 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 HSPH1Q92598 858 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 C18orf8Q96DM3 657 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SARS2Q9NP81 518 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 TARSL2A2RTX5 802 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 LMNAP02545 664 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 ADKP55263 362 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 CYP27A1Q02318 531 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 NCOA4Q13772 614 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 PTPROQ16827 1216 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 APOBEC3HQ6NTF7 200 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 LRRC8AQ8IWT6 810 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 CYP3A43Q9HB55 503 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 TMEM39AQ9NV64 488 aa8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 TPX2Q9ULW0 747 aaKnown RBP8.75□□□□□ -1.01
PCDHB1-201ENST00000306549 SPDYE5A6NIY4 337 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ZNF135P52742 658 aaPredicted RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 GUCY2DQ02846 1103 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ADCY1Q08828 1119 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 SPDYE7PQ495Y7 208 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 TDRD10Q5VZ19 366 aaKnown RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 FBXO44Q9H4M3 255 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ARHGAP26Q9UNA1 814 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 CAPN7Q9Y6W3 813 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 C5orf58C9J3I9 102 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 FAM47E-STBD1D6RA91 191 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 TRPA1O75762 1119 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 FAM200BP0CF97 657 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 MCF2P10911 925 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 GUCA1AP43080 201 aaPredicted RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 CCT5P48643 541 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 GABPB1Q06547 395 aaPredicted RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 PDCLQ13371 301 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 CDO1Q16878 200 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 MAP1SQ66K74 1059 aaPredicted RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 CHMP1BQ7LBR1 199 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 SCFD1Q8WVM8 642 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 RASSF10A6NK89 507 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 COPS2P61201 443 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 IKBKEQ14164 716 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 P3H1Q32P28 736 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 RNF208Q9H0X6 261 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ENTPD7Q9NQZ7 604 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 NRBP1Q9UHY1 535 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 OGTO15294 1046 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 CFLARO15519 480 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 GADD45BO75293 160 aaPredicted RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 TOMM70O94826 608 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 GUCA1CO95843 209 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 EIF3BP55884 814 aaKnown RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ELF2Q15723 593 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 SNCBQ16143 134 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 SNRNP35Q16560 246 aaKnown RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ALKBH5Q6P6C2 394 aaKnown RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ZNF512Q96ME7 567 aaPredicted RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 CAMKK2Q96RR4 588 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 PPP1R16BQ96T49 567 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 FAM217BQ9NTX9 383 aaPredicted RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 NDE1Q9NXR1 346 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 RNASEH1O60930 286 aaKnown RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 SERPINI2O75830 405 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 F9P00740 461 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 HDAC4P56524 1084 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 OSCP1Q8WVF1 389 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 GCKP35557 465 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 NCKAP1LP55160 1127 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 NLRP11P59045 1033 aaKnown RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 FOXD4Q12950 439 aaPredicted RBP8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 VGLL4Q14135 290 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 NAA35Q5VZE5 725 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 LRRC8BQ6P9F7 803 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 DYRK3O43781 588 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ADCY3O60266 1144 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 C16orf62Q7Z3J2 963 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ZFYVE19Q96K21 471 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 ANLNQ9NQW6 1124 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 PSD3Q9NYI0 1048 aa8.74□□□□□ -1.01
PCDHB1-201ENST00000306549 FBXO21O94952 628 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 TDP2O95551 362 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ALDH2P05091 517 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 HIST1H2AGP0C0S8 130 aaPredicted RBP8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 HIST1H2ADP20671 130 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 SNAP25P60880 206 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 CCDC144BQ3MJ40 725 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 ALS2CLQ60I27 953 aa8.73□□□□□ -1.01
PCDHB1-201ENST00000306549 TAS2R42Q7RTR8 314 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms