RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 KCNJ1P48048 391 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 SARSP49591 514 aaKnown RBP15.52■□□□□ 0.08
SCN3B-201ENST00000299333 KRT76Q01546 638 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 NR1I3Q14994 352 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 FUT11Q495W5 492 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 MOV10L1Q9BXT6 1211 aaKnown RBP15.52■□□□□ 0.08
SCN3B-201ENST00000299333 TMEM51Q9NW97 253 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 ARHGEF38Q9NXL2 777 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 GRID1Q9ULK0 1009 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 ITIH6Q6UXX5 1313 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 TRIM24O15164 1050 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 R3HDM1Q15032 1099 aaKnown RBP15.52■□□□□ 0.08
SCN3B-201ENST00000299333 SUGP1Q8IWZ8 645 aaKnown RBP15.52■□□□□ 0.08
SCN3B-201ENST00000299333 KLHL23Q8NBE8 558 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 ARHGEF26Q96DR7 871 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 STRBPQ96SI9 672 aaKnown RBP15.52■□□□□ 0.08
SCN3B-201ENST00000299333 SPON2Q9BUD6 331 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 PBRM1Q86U86 1689 aa15.52■□□□□ 0.08
SCN3B-201ENST00000299333 MTMR1Q13613 665 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 DGKHQ86XP1 1220 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 MCPH1Q8NEM0 835 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 CATSPER2Q96P56 530 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 UTYO14607 1347 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 PRAMEF22A3QJZ6 481 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 SERPINB5P36952 375 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 KBTBD12Q3ZCT8 623 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 ENOSF1Q7L5Y1 443 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 WDR60Q8WVS4 1066 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 HES6Q96HZ4 224 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 PAIP1Q9H074 479 aaKnown RBP15.52■□□□□ 0.07
SCN3B-201ENST00000299333 IMPAD1Q9NX62 359 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 TFR2Q9UP52 801 aa15.52■□□□□ 0.07
SCN3B-201ENST00000299333 C4BPBP20851 252 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 LPCAT2Q7L5N7 544 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 THEM5Q8N1Q8 247 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 RIBC1Q8N443 379 aaPredicted RBP15.51■□□□□ 0.07
SCN3B-201ENST00000299333 FAM217BQ9NTX9 383 aaPredicted RBP15.51■□□□□ 0.07
SCN3B-201ENST00000299333 LCP1P13796 627 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 CSTF3Q12996 717 aaKnown RBP15.51■□□□□ 0.07
SCN3B-201ENST00000299333 BFSP2Q13515 415 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 MROH9Q5TGP6 573 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 DENND6AQ8IWF6 608 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 C3orf20Q8ND61 904 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 EPS8L3Q8TE67 593 aaKnown RBP15.51■□□□□ 0.07
SCN3B-201ENST00000299333 MIEF2Q96C03 454 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 TFE3P19532 575 aaPredicted RBP15.51■□□□□ 0.07
SCN3B-201ENST00000299333 GTF2H3Q13889 308 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 TERB1Q8NA31 727 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 CASKIN2Q8WXE0 1202 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 FAM111AQ96PZ2 611 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 CYLDQ9NQC7 956 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 BTBD7Q9P203 1132 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 CDHR2Q9BYE9 1310 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 C1orf232A0A0U1RR37 186 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 SSU72P8A0A1W2PR75 194 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 SUPT3HB4E1H0 165 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 NMT2O60551 498 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 COL23A1Q86Y22 540 aaPredicted RBP15.51■□□□□ 0.07
SCN3B-201ENST00000299333 LEMD3Q9Y2U8 911 aa15.51■□□□□ 0.07
SCN3B-201ENST00000299333 SERPINB8P50452 374 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 MAPK11Q15759 364 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 C17orf50Q8WW18 174 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 NARS2Q96I59 477 aaKnown RBP15.5■□□□□ 0.07
SCN3B-201ENST00000299333 LY9Q9HBG7 655 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 C3orf70A6NLC5 250 aaPredicted RBP15.5■□□□□ 0.07
SCN3B-201ENST00000299333 TNFAIP2Q03169 654 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 COG2Q14746 738 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
SCN3B-201ENST00000299333 NYAP1Q6ZVC0 841 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 LRRC39Q96DD0 335 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 TSPAN17Q96FV3 270 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 SELENONQ9NZV5 590 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 TBKBP1A7MCY6 615 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 PDZK1P1A8MUH7 402 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 ZBTB5O15062 677 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 CYP2D6P10635 497 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
SCN3B-201ENST00000299333 TUBA8Q9NY65 449 aaPredicted RBP15.5■□□□□ 0.07
SCN3B-201ENST00000299333 APPL1Q9UKG1 709 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 NPHP3-ACAD11A0A0J9YXS1 232 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 SNPHO15079 494 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 SPRP35270 261 aaPredicted RBP15.5■□□□□ 0.07
SCN3B-201ENST00000299333 ZNF235Q14590 738 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 SHCBP1Q8NEM2 672 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 AFG1LQ8WV93 481 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 SERPINB12Q96P63 405 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 GCNAQ96QF7 691 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 ECSITQ9BQ95 431 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 GOLPH3Q9H4A6 298 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 ARHGEF3Q9NR81 526 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 UVRAGQ9P2Y5 699 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 ERVK-7P63135 1459 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 ABCB11O95342 1321 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 UBAP1LF5GYI3 381 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 CAPSLQ8WWF8 208 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 DCUN1D5Q9BTE7 237 aa15.5■□□□□ 0.07
SCN3B-201ENST00000299333 NFX1Q12986 1120 aaKnown RBP15.49■□□□□ 0.07
SCN3B-201ENST00000299333 KCNB1Q14721 858 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 ANKS3Q6ZW76 656 aa15.49■□□□□ 0.07
SCN3B-201ENST00000299333 TNIP2Q8NFZ5 429 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms