RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 MOGSQ13724 837 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 CCNG2Q16589 344 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 Q4G0T1 1027 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 TTC7BQ86TV6 843 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 RASSF3Q86WH2 238 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 ST13P4Q8IZP2 240 aaPredicted RBP12.03□□□□□ -0.48
TRUB1-201ENST00000298746 FBXL13Q8NEE6 735 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRUB1-201ENST00000298746 WDR60Q8WVS4 1066 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 RSAD2Q8WXG1 361 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 CD101Q93033 1021 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 MIPEPQ99797 713 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 TMEM121Q9BTD3 319 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 KIFC3Q9BVG8 833 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 C10orf88Q9H8K7 445 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 PDP2Q9P2J9 529 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 NARFQ9UHQ1 456 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 ABLIM1O14639 778 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 SLC26A4O43511 780 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 HNRNPCL1O60812 293 aaKnown RBP12.03□□□□□ -0.48
TRUB1-201ENST00000298746 POLR2MP0CAP2 368 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 IVDP26440 423 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 SERPINB6P35237 376 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 CENPCQ03188 943 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 EFTUD2Q15029 972 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRUB1-201ENST00000298746 SNRNP35Q16560 246 aaKnown RBP12.03□□□□□ -0.48
TRUB1-201ENST00000298746 OTOP1Q7RTM1 612 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 FAM71AQ8IYT1 594 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 C12orf50Q8NA57 414 aaPredicted RBP12.03□□□□□ -0.48
TRUB1-201ENST00000298746 CCDC17Q96LX7 622 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 GPRC5CQ9NQ84 441 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 SAR1AQ9NR31 198 aa12.03□□□□□ -0.48
TRUB1-201ENST00000298746 RNF8O76064 485 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 BGNP21810 368 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 TMPRSS15P98073 1019 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 MAP7Q14244 749 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 APLFQ8IW19 511 aaPredicted RBP12.02□□□□□ -0.48
TRUB1-201ENST00000298746 OGFOD1Q8N543 542 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 ZCCHC9Q8N567 271 aaKnown RBP12.02□□□□□ -0.48
TRUB1-201ENST00000298746 GLIS1Q8NBF1 620 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 PSPC1Q8WXF1 523 aaKnown RBP12.02□□□□□ -0.48
TRUB1-201ENST00000298746 JDP2Q8WYK2 163 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 EHMT1Q9H9B1 1298 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 SLC17A7Q9P2U7 560 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 VAV3Q9UKW4 847 aa12.02□□□□□ -0.48
TRUB1-201ENST00000298746 ALDH18A1P54886 795 aaKnown RBP12.02□□□□□ -0.49
TRUB1-201ENST00000298746 GEMIN4P57678 1058 aaKnown RBP12.02□□□□□ -0.49
TRUB1-201ENST00000298746 AP2B1P63010 937 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 SGSM1Q2NKQ1 1148 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 XKR9Q5GH70 373 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 RGS9BPQ6ZS82 235 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 ENDOVQ8N8Q3 282 aaKnown RBP12.02□□□□□ -0.49
TRUB1-201ENST00000298746 SEMA4DQ92854 862 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 LENG9Q96B70 501 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 HSD17B14Q9BPX1 270 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 SLC13A1Q9BZW2 595 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 RANBP17Q9H2T7 1088 aaKnown RBP12.02□□□□□ -0.49
TRUB1-201ENST00000298746 NOCTQ9UK39 431 aaKnown RBP12.02□□□□□ -0.49
TRUB1-201ENST00000298746 GRID1Q9ULK0 1009 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 TMEM150BA6NC51 233 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 IPO5O00410 1097 aaKnown RBP12.02□□□□□ -0.49
TRUB1-201ENST00000298746 FCHO1O14526 889 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 USP1O94782 785 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 HARSP12081 509 aaKnown RBP12.02□□□□□ -0.49
TRUB1-201ENST00000298746 SLC1A1P43005 524 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 NEK3P51956 506 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 DEUP1Q05D60 604 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 MCL1Q07820 350 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 USP4Q13107 963 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 RASA2Q15283 850 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 TMEM63BQ5T3F8 832 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 MTBPQ96DY7 904 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 CLPTM1LQ96KA5 538 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 TAS2R1Q9NYW7 299 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 PCDHB4Q9Y5E5 795 aa12.02□□□□□ -0.49
TRUB1-201ENST00000298746 COL4A1P02462 1669 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 SPECC1L-ADORA2AF8WAN1 911 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 HNRNPDLO14979 420 aaKnown RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 NDUFB10O96000 172 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 AMPD1P23109 780 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 TAS2R40P59535 323 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 DSG1Q02413 1049 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 NFX1Q12986 1120 aaKnown RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 RINLQ6ZS11 566 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 SLC26A7Q8TE54 656 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 TEKT1Q969V4 418 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 FAM81BQ96LP2 452 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 PAFAH2Q99487 392 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 MRPL47Q9HD33 250 aaKnown RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 LRP5O75197 1615 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 SRCAPQ6ZRS2 3230 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 ARP10275 920 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 PSMC4P43686 418 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 MTMR2Q13614 643 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 ABCB5Q2M3G0 1257 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 GRAMD1BQ3KR37 738 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 BRDTQ58F21 947 aaPredicted RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 FAM182BQ5T319 152 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms