RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TJP3O95049 919 aa20.26■□□□□ 0.83
TRA2A-201ENST00000297071 TROVE2P10155 538 aaKnown RBP eCLIP20.26■□□□□ 0.83
TRA2A-201ENST00000297071 KRT5P13647 590 aa20.26■□□□□ 0.83
TRA2A-201ENST00000297071 CENPUQ71F23 418 aa20.26■□□□□ 0.83
TRA2A-201ENST00000297071 ZNF75CPQ92670 426 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-201ENST00000297071 NKD2Q969F2 451 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-201ENST00000297071 PWWP2AQ96N64 755 aa20.26■□□□□ 0.83
TRA2A-201ENST00000297071 VPS11Q9H270 941 aa20.26■□□□□ 0.83
TRA2A-201ENST00000297071 MMADHCQ9H3L0 296 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-201ENST00000297071 IP6K2Q9UHH9 426 aa20.26■□□□□ 0.83
TRA2A-201ENST00000297071 CNTN6Q9UQ52 1028 aa20.26■□□□□ 0.83
TRA2A-201ENST00000297071 GOLGA8IPA6NC78 632 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 GOLGA8JA6NMD2 632 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 SFNP31947 248 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 JAK3P52333 1124 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 RTP1P59025 263 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 PKN2Q16513 984 aaKnown RBP20.25■□□□□ 0.83
TRA2A-201ENST00000297071 IRGCQ6NXR0 463 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 SEPT14Q6ZU15 432 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 NLRP9Q7RTR0 991 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 GPD1LQ8N335 351 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 DHRS4Q9BTZ2 278 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 ANKFY1Q9P2R3 1169 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 ZFP69BQ9UJL9 534 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 BCS1LQ9Y276 419 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 ASTN2O75129 1339 aaPredicted RBP20.25■□□□□ 0.83
TRA2A-201ENST00000297071 CCDC22O60826 627 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 TGDSO95455 350 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 ITGAVP06756 1048 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 KRT15P19012 456 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 CA4P22748 312 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 CACNB3P54284 484 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 TAS2R40P59535 323 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 PSMC5P62195 406 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 NOMO3P69849 1222 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 OCRLQ01968 901 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 NFX1Q12986 1120 aaKnown RBP20.25■□□□□ 0.83
TRA2A-201ENST00000297071 CTC1Q2NKJ3 1217 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 RNASEH2BQ5TBB1 312 aaKnown RBP20.25■□□□□ 0.83
TRA2A-201ENST00000297071 NAIF1Q69YI7 327 aaPredicted RBP20.25■□□□□ 0.83
TRA2A-201ENST00000297071 CYP4F22Q6NT55 531 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 GSTA5Q7RTV2 222 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 OTOAQ7RTW8 1153 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 LDHDQ86WU2 507 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 PAIP2Q9BPZ3 127 aaKnown RBP20.25■□□□□ 0.83
TRA2A-201ENST00000297071 TMX4Q9H1E5 349 aaPredicted RBP20.25■□□□□ 0.83
TRA2A-201ENST00000297071 PCDH9Q9HC56 1237 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 GRID1Q9ULK0 1009 aa20.25■□□□□ 0.83
TRA2A-201ENST00000297071 LRRD1A4D1F6 860 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 SPAG7O75391 227 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 GM2AP17900 193 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 PHBP35232 272 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 RPA3P35244 121 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-201ENST00000297071 VPS41P49754 854 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 KLC1Q07866 573 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 CBLBQ13191 982 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 MAMLD1Q13495 774 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 ZRSR2Q15696 482 aaKnown RBP20.24■□□□□ 0.83
TRA2A-201ENST00000297071 SLC1A5Q15758 541 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 TKFCQ3LXA3 575 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 BRDTQ58F21 947 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-201ENST00000297071 DNAJC9Q8WXX5 260 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 CCDC127Q96BQ5 260 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 SLC24A3Q9HC58 644 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 KCNG1Q9UIX4 513 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 EFR3BQ9Y2G0 817 aa20.24■□□□□ 0.83
TRA2A-201ENST00000297071 FAM170AA1A519 330 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 H0YCG3 227 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 ATP4AP20648 1035 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 VHLP40337 213 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 GEMIN4P57678 1058 aaKnown RBP20.23■□□□□ 0.83
TRA2A-201ENST00000297071 UBXN2AP68543 259 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 DMP1Q13316 513 aaPredicted RBP20.23■□□□□ 0.83
TRA2A-201ENST00000297071 KRT72Q14CN4 511 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 OASLQ15646 514 aaKnown RBP20.23■□□□□ 0.83
TRA2A-201ENST00000297071 ADGRD1Q6QNK2 874 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 C4orf50Q6ZRC1 276 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 MAEAQ7L5Y9 396 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 CLNKQ7Z7G1 428 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 ABRAQ8N0Z2 381 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 FEZF2Q8TBJ5 459 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 HEMGNQ9BXL5 484 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 DENND2DQ9H6A0 471 aaPredicted RBP20.23■□□□□ 0.83
TRA2A-201ENST00000297071 SLCO1B3Q9NPD5 702 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 PARVAQ9NVD7 372 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 PECAM1P16284 738 aaPredicted RBP20.23■□□□□ 0.83
TRA2A-201ENST00000297071 ECE1P42892 770 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 NPTX2P47972 431 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 PTDSS1P48651 473 aaKnown RBP20.23■□□□□ 0.83
TRA2A-201ENST00000297071 VCPP55072 806 aaKnown RBP20.23■□□□□ 0.83
TRA2A-201ENST00000297071 KLHL38Q2WGJ6 581 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 WDR44Q5JSH3 913 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 SLC27A3Q5K4L6 730 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 MCF2L2Q86YR7 1114 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 ZNF276Q8N554 614 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 KCNV2Q8TDN2 545 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 ZNF333Q96JL9 665 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 SLITRK1Q96PX8 696 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 SENP7Q9BQF6 1050 aa20.23■□□□□ 0.83
TRA2A-201ENST00000297071 DDX56Q9NY93 547 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms