RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 H7C0C1 242 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 LPXNO60711 386 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 ATP5OP48047 213 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 RIPK1Q13546 671 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 KCNT1Q5JUK3 1230 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 HSPH1Q92598 858 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 RNPEPL1Q9HAU8 725 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 TMEM8AQ9HCN3 771 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 NKX1-2Q9UD57 310 aaPredicted RBP14.13□□□□□ -0.15
SCAF4-201ENST00000286835 SLC26A4O43511 780 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 STAM2O75886 525 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 ZCCHC18P0CG32 403 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 GNAT1P11488 350 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 CALB2P22676 271 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 TMPRSS15P98073 1019 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 NFX1Q12986 1120 aaKnown RBP14.13□□□□□ -0.15
SCAF4-201ENST00000286835 NR1H3Q13133 447 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 CCDC110Q8TBZ0 833 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 PARD3BQ8TEW8 1205 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 FAM81BQ96LP2 452 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 GABBR1Q9UBS5 961 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 ZMYM2Q9UBW7 1377 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 F5H423 210 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-201ENST00000286835 CHRNB2P17787 502 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 ALCAMQ13740 583 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 MIS18BP1Q6P0N0 1132 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 MCOLN2Q8IZK6 566 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 PPM1NQ8N819 430 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 TSSK1BQ9BXA7 367 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 ARMCX1Q9P291 453 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 CETPP11597 493 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 RARRES1P49788 294 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 HMGCS2P54868 508 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 ARL4CP56559 192 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 MFSD5Q6N075 450 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 FAM71AQ8IYT1 594 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 STK32AQ8WU08 396 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 GPR88Q9GZN0 384 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 PDGFDQ9GZP0 370 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-201ENST00000286835 PSMC3IPQ9P2W1 217 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-201ENST00000286835 ZMYND8Q9ULU4 1186 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-201ENST00000286835 LGR5O75473 907 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 PGM1P36871 562 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 SYDE1Q6ZW31 735 aaPredicted RBP14.12□□□□□ -0.15
SCAF4-201ENST00000286835 FAM13CQ8NE31 585 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 TTC25Q96NG3 672 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 MXRA8Q9BRK3 442 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 MYOZ2Q9NPC6 264 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 GGA3Q9NZ52 723 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 SMG5Q9UPR3 1016 aaKnown RBP14.12□□□□□ -0.15
SCAF4-201ENST00000286835 IGKV6D-41A0A0C4DH26 115 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 MAP3K6O95382 1288 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 RFC5P40937 340 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 SLC1A1P43005 524 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 PTDSS1P48651 473 aaKnown RBP14.12□□□□□ -0.15
SCAF4-201ENST00000286835 THOC5Q13769 683 aaKnown RBP14.12□□□□□ -0.15
SCAF4-201ENST00000286835 TFDP1Q14186 410 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 CLEC16AQ2KHT3 1053 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 RBM41Q96IZ5 413 aaKnown RBP14.12□□□□□ -0.15
SCAF4-201ENST00000286835 FAM111AQ96PZ2 611 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 RMDN3Q96TC7 470 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 DEFB129Q9H1M3 183 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 EBF2Q9HAK2 575 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 KIAA1586Q9HCI6 787 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 TBX20Q9UMR3 447 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 PCDHB2Q9Y5E7 798 aa14.12□□□□□ -0.15
SCAF4-201ENST00000286835 FSCN2O14926 492 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 HLA-DRAP01903 254 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 KCNA3P22001 575 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 PSMA2P25787 234 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 TAS2R40P59535 323 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 PTK6Q13882 451 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 CCDC124Q96CT7 223 aaKnown RBP14.11□□□□□ -0.15
SCAF4-201ENST00000286835 SH3GL3Q99963 347 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 TXLNGYQ9BZA5 131 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 PHLPP1O60346 1717 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 H3BRJ5 948 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 TFAMQ00059 246 aaKnown RBP14.11□□□□□ -0.15
SCAF4-201ENST00000286835 CDO1Q16878 200 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 CYP4A22Q5TCH4 519 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 SWSAP1Q6NVH7 229 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 GPD1LQ8N335 351 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 OTUD5Q96G74 571 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 SCINQ9Y6U3 715 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 UBE4BO95155 1302 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 C2orf71A6NGG8 1288 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 PIK3R2O00459 728 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 NFIBO00712 420 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 P4HA2O15460 535 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 AP1G2O75843 785 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 EPHB1P54762 984 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 WDR4P57081 412 aaKnown RBP14.11□□□□□ -0.15
SCAF4-201ENST00000286835 DARS2Q6PI48 645 aaKnown RBP14.11□□□□□ -0.15
SCAF4-201ENST00000286835 LRRC6Q86X45 466 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 KCTD6Q8NC69 237 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 KAT6AQ92794 2004 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 COL4A1P02462 1669 aa14.11□□□□□ -0.15
SCAF4-201ENST00000286835 CCDC22O60826 627 aa14.1□□□□□ -0.15
SCAF4-201ENST00000286835 TOM1L1O75674 476 aa14.1□□□□□ -0.15
SCAF4-201ENST00000286835 CIITAP33076 1130 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms